DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPPHLE
Uniprot ID:
Q13480
Source protein:
GRB2-associated-binding protein 1
Source gene:
GAB1
Class:
LIG_APCC_ABBA_1
Location:
167:172
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9855
ASA_SCORE:
98.9667
COIL:
0.9392
CONS_SCORE:
0.3565
DSS_SCORE:
0.4856
HELIX:
0.0305
FCONS_SCORE:
0.8894
RIG_SCORE:
0.743
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I176M
TCGA-AP-A1E0
UCEC
TCGA
VPPHLE
LIG_APCC_ABBA_1
0.2222
p.I176M
DO43154
UCEC
ICGC
VPPHLE
LIG_APCC_ABBA_1
0.2222
p.P169L
TCGA-EE-A2MR
SKCM
TCGA
VPPHLE
LIG_APCC_ABBA_1
0.6471
p.P169L
DO37819
SKCM
ICGC
VPPHLE
LIG_APCC_ABBA_1
0.6471
p.G175C
DO229019
LICA
ICGC
VPPHLE
LIG_APCC_ABBA_1
0.25
p.T157A
SIDM01112
Osteosarcoma
GDSC
VPPHLE
LIG_APCC_ABBA_1
0.0556
p.D165N
MFE-319
endometrium
COSMIC
VPPHLE
LIG_APCC_ABBA_1
0.2778
p.L167S
NB1
autonomic_ganglia
COSMIC
VPPHLE
LIG_APCC_ABBA_1
0.7667
p.L167S
KYSE-180
oesophagus
COSMIC
VPPHLE
LIG_APCC_ABBA_1
0.7667
p.L167S
IA-LM
lung
COSMIC
VPPHLE
LIG_APCC_ABBA_1
0.7667
Drug responses associated with GAB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPPHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13480
GRB2-associated-binding protein 1
LIG_APCC_ABBA_1
167:172
VPPHLE
APC,CDC20,FZR1
0.9855
More...