DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPPYSE
Uniprot ID:
Q5QJE6
Source protein:
Deoxynucleotidyltransferase terminal-interacting protein 2
Source gene:
DNTTIP2
Class:
LIG_APCC_ABBA_1
Location:
619:624
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9999
ASA_SCORE:
78.4167
COIL:
0.8342
CONS_SCORE:
0.5301
DSS_SCORE:
0.481
HELIX:
0.1327
FCONS_SCORE:
1.0318
RIG_SCORE:
0.7413
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P620S
TCGA-DV-A4W0
KIRC
TCGA
VPPYSE
LIG_APCC_ABBA_1
0.5641
p.P620S
DO219235
KIRC
ICGC
VPPYSE
LIG_APCC_ABBA_1
0.5641
p.R633H
DO50393
ESAD
ICGC
VPPYSE
LIG_APCC_ABBA_1
0.0833
p.R633H
SIDM00777
Colorectal Carcinoma
GDSC
VPPYSE
LIG_APCC_ABBA_1
0.0833
p.R633H
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VPPYSE
LIG_APCC_ABBA_1
0.0833
p.R633H
SIDM00400
B-Cell Non-Hodgkin's Lymphoma
GDSC
VPPYSE
LIG_APCC_ABBA_1
0.0833
p.S623G
DO233885
GACA
ICGC
VPPYSE
LIG_APCC_ABBA_1
0.6993
p.P621Q
DO229036
LICA
ICGC
VPPYSE
LIG_APCC_ABBA_1
0.7035
p.Y627C
SIDM00334
Endometrial Carcinoma
GDSC
VPPYSE
LIG_APCC_ABBA_1
0.25
p.Y627C
ACH-000879
Endometrial/Uterine Cancer
CCLE
VPPYSE
LIG_APCC_ABBA_1
0.25
p.K615N
SIDM01081
Oral Cavity Carcinoma
GDSC
VPPYSE
LIG_APCC_ABBA_1
0.3333
p.K615N
ACH-000238
Head and Neck Cancer
CCLE
VPPYSE
LIG_APCC_ABBA_1
0.3333
p.K615N
SCC-4
upper_aerodigestive_tract
COSMIC
VPPYSE
LIG_APCC_ABBA_1
0.3333
Drug responses associated with DNTTIP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPPYSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5QJE6
Deoxynucleotidyltransferase terminal-interacting protein 2
LIG_APCC_ABBA_1
619:624
VPPYSE
APC,CDC20,FZR1
0.9999
More...