DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPRTPSRT
Uniprot ID:
Q8WWR8
Source protein:
Sialidase-4
Source gene:
NEU4
Class:
DEG_SCF_FBW7_1
Location:
3:10
E3 ligase:
FBXW7
DEGRON score:
0.7127
ASA_SCORE:
96.3125
COIL:
0.8231
CONS_SCORE:
0.4699
DSS_SCORE:
0.7002
HELIX:
0.0083
FCONS_SCORE:
0.8239
RIG_SCORE:
0.7201
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G15V
TCGA-D3-A2J9
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.G15V
DO38141
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.R9K
TCGA-EE-A29E
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.6126
p.R9K
DO37831
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.6126
p.P8T
TCGA-FS-A1Z4
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.P8T
DO37462
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.R17C
DO51878
BLCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17C
DO229389
BTCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17C
DO36256
PRAD
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.P7T
DO15246
HNSC
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.P7S
DO220899
MELA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.6752
p.E16K
DO222678
MELA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.E16K
DO37770
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.E16D
DO50707
ORCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.R15W
DO36556
READ
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.L12F
DO37896
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.2778
p.R17M
DO37410
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17M
NCI-H2342
lung
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R15L
DO37431
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.A5S
SIDM00568
Gastric Carcinoma
GDSC
VPRTPSRT
DEG_SCF_FBW7_1
0.7588
p.A5S
OCUM-1
stomach
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.7588
p.A6T
SIDM01776
Plasma Cell Myeloma
GDSC
VPRTPSRT
DEG_SCF_FBW7_1
0.7139
p.R17K
ACH-000638
Lung Cancer
CCLE
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17K
NCI-H441
lung
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with NEU4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPRTPSRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWR8
Sialidase-4
DEG_SCF_FBW7_1
3:10
VPRTPSRT
FBXW7
0.7127
More...