DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPRTPSRT
Uniprot ID:
Q8WWR8
Source protein:
Sialidase-4
Source gene:
NEU4
Class:
DEG_SCF_FBW7_1
Location:
3:10
E3 ligase:
FBXW7
DEGRON score:
0.7127
ASA_SCORE:
96.3125
COIL:
0.8231
CONS_SCORE:
0.4699
DSS_SCORE:
0.7002
HELIX:
0.0083
FCONS_SCORE:
0.8239
RIG_SCORE:
0.7201
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A5S
SIDM00568
Gastric Carcinoma
GDSC
VPRTPSRT
DEG_SCF_FBW7_1
0.7588
p.A5S
OCUM-1
stomach
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.7588
p.A6T
SIDM01776
Plasma Cell Myeloma
GDSC
VPRTPSRT
DEG_SCF_FBW7_1
0.7139
p.P8T
TCGA-FS-A1Z4
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.P8T
DO37462
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.P7T
DO15246
HNSC
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.7031
p.P7S
DO220899
MELA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.6752
p.R9K
TCGA-EE-A29E
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.6126
p.R9K
DO37831
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.6126
p.L12F
DO37896
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.2778
p.G15V
TCGA-D3-A2J9
SKCM
TCGA
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.G15V
DO38141
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.R15W
DO36556
READ
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.R15L
DO37431
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1944
p.E16K
DO222678
MELA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.E16K
DO37770
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.E16D
DO50707
ORCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1667
p.R17C
DO51878
BLCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17C
DO229389
BTCA
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17C
DO36256
PRAD
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17M
DO37410
SKCM
ICGC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17M
NCI-H2342
lung
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17K
ACH-000638
Lung Cancer
CCLE
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
p.R17K
NCI-H441
lung
COSMIC
VPRTPSRT
DEG_SCF_FBW7_1
0.1389
Showing 1 to 24 of 24 entries
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Drug responses associated with NEU4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VPRTPSRT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWR8
Sialidase-4
DEG_SCF_FBW7_1
3:10
VPRTPSRT
FBXW7
0.7127
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