DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPSTPEAS
Uniprot ID:
Q8NAM6
Source protein:
Zinc finger and SCAN domain-containing protein 4
Source gene:
ZSCAN4
Class:
DEG_SCF_FBW7_1
Location:
426:433
E3 ligase:
FBXW7
DEGRON score:
0.5522
ASA_SCORE:
83.7625
COIL:
0.9243
CONS_SCORE:
0.2115
DSS_SCORE:
0.8677
HELIX:
0.0219
FCONS_SCORE:
0.626
RIG_SCORE:
0.6318
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P427S
TCGA-13-2057
OV
TCGA
VPSTPEAS
DEG_SCF_FBW7_1
0.5641
p.P427S
DO31320
OV
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.5641
p.E419K
TCGA-33-6737
LUSC
TCGA
VPSTPEAS
DEG_SCF_FBW7_1
0.1389
p.E419K
DO48290
ESCA
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.1389
p.E419K
DO26866
LUSC
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.1389
p.S433F
TCGA-D3-A8GI
SKCM
TCGA
VPSTPEAS
DEG_SCF_FBW7_1
0.7982
p.S433F
DO50284
SKCM
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.7982
p.T429I
TCGA-D5-6540
COAD
TCGA
VPSTPEAS
DEG_SCF_FBW7_1
0.7078
p.T429I
DO9708
COAD
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.7078
p.E431K
TCGA-FW-A3R5
SKCM
TCGA
VPSTPEAS
DEG_SCF_FBW7_1
0.591
p.E431K
DO37406
SKCM
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.591
p.S428C
DO225367
BRCA
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.643
p.R416S
DO52455
COCA
ICGC
VPSTPEAS
DEG_SCF_FBW7_1
0.0556
p.V426I
ACH-001607
Gallbladder Cancer
CCLE
VPSTPEAS
DEG_SCF_FBW7_1
0.5965
Drug responses associated with ZSCAN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSTPEAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NAM6
Zinc finger and SCAN domain-containing protein 4
DEG_SCF_FBW7_1
426:433
VPSTPEAS
FBXW7
0.5522
More...