DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTPEKE
Uniprot ID:
P12036
Source protein:
Neurofilament heavy polypeptide
Source gene:
NEFH
Class:
DEG_SCF_FBW7_2
Location:
909:915
E3 ligase:
FBXW7
DEGRON score:
0.9967
ASA_SCORE:
116.8857
COIL:
0.9484
CONS_SCORE:
0.7544
DSS_SCORE:
0.5903
HELIX:
0.0313
FCONS_SCORE:
1.0018
RIG_SCORE:
0.6276
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P911T
TCGA-32-4209
GBM
TCGA
VPTPEKE
DEG_SCF_FBW7_2
0.7031
p.P911T
DO13336
GBM
ICGC
VPTPEKE
DEG_SCF_FBW7_2
0.7031
p.V916A
TCGA-B5-A3FA
UCEC
TCGA
VPTPEKE
DEG_SCF_FBW7_2
0.3056
p.V916A
DO52402
UCEC
ICGC
VPTPEKE
DEG_SCF_FBW7_2
0.3056
p.E924K
TCGA-CA-6717
COAD
TCGA
VPTPEKE
DEG_SCF_FBW7_2
0.0833
p.E924K
DO8264
COAD
ICGC
VPTPEKE
DEG_SCF_FBW7_2
0.0833
p.E915K
TCGA-W3-A824
SKCM
TCGA
VPTPEKE
DEG_SCF_FBW7_2
0.7022
p.E915K
DO51271
SKCM
ICGC
VPTPEKE
DEG_SCF_FBW7_2
0.7022
p.D919N
ACH-001567
Skin Cancer
CCLE
VPTPEKE
DEG_SCF_FBW7_2
0.3333
Drug responses associated with NEFH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTPEKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12036
Neurofilament heavy polypeptide
DEG_SCF_FBW7_2
909:915
VPTPEKE
FBXW7
0.9967
More...