DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTPGPS
Uniprot ID:
Q8NFC6
Source protein:
Biorientation of chromosomes in cell division protein 1-like 1
Source gene:
BOD1L1
Class:
DEG_SCF_FBW7_1
Location:
188:194
E3 ligase:
FBXW7
DEGRON score:
0.9894
ASA_SCORE:
81.8571
COIL:
0.955
CONS_SCORE:
0.5159
DSS_SCORE:
0.6169
HELIX:
0.0207
FCONS_SCORE:
0.8315
RIG_SCORE:
0.6228
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D180G
TCGA-AA-3715
COAD
TCGA
VPTPGPS
DEG_SCF_FBW7_1
0.1111
p.D180G
DO8018
COAD
ICGC
VPTPGPS
DEG_SCF_FBW7_1
0.1111
p.S203L
DO10172
COAD
ICGC
VPTPGPS
DEG_SCF_FBW7_1
0.0833
p.T185K
DO229019
LICA
ICGC
VPTPGPS
DEG_SCF_FBW7_1
0.25
p.N199S
ACH-001991
Primary
CCLE
VPTPGPS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with BOD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTPGPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SCF_FBW7_1
188:194
VPTPGPS
FBXW7
0.9894
More...