DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTPNQT
Uniprot ID:
Q9H330
Source protein:
Transmembrane protein 245
Source gene:
TMEM245
Class:
DEG_SCF_FBW7_1
Location:
851:857
E3 ligase:
FBXW7
DEGRON score:
0.6956
ASA_SCORE:
96.1857
COIL:
0.9616
CONS_SCORE:
0.2849
DSS_SCORE:
0.5608
HELIX:
0.0156
FCONS_SCORE:
0.7784
RIG_SCORE:
0.6672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L844I
DO229022
LICA
ICGC
VPTPNQT
DEG_SCF_FBW7_1
0.1389
p.A842D
DO229009
LICA
ICGC
VPTPNQT
DEG_SCF_FBW7_1
0.0833
p.Q856R
DO228906
LICA
ICGC
VPTPNQT
DEG_SCF_FBW7_1
0.6218
p.R865W
DO229268
THCA
ICGC
VPTPNQT
DEG_SCF_FBW7_1
0.1111
p.T853M
SIDM00789
Colorectal Carcinoma
GDSC
VPTPNQT
DEG_SCF_FBW7_1
0.7423
p.T853M
HCT-15
large_intestine
COSMIC
VPTPNQT
DEG_SCF_FBW7_1
0.7423
p.S841N
SIDM00145
T-Lymphoblastic Leukemia
GDSC
VPTPNQT
DEG_SCF_FBW7_1
0.0556
p.S841N
ACH-001127
Leukemia
CCLE
VPTPNQT
DEG_SCF_FBW7_1
0.0556
p.S841N
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
VPTPNQT
DEG_SCF_FBW7_1
0.0556
p.P860H
ACH-001061
Colon/Colorectal Cancer
CCLE
VPTPNQT
DEG_SCF_FBW7_1
0.25
Drug responses associated with TMEM245 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTPNQT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H330
Transmembrane protein 245
DEG_SCF_FBW7_1
851:857
VPTPNQT
FBXW7
0.6956
More...