DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTPPPS
Uniprot ID:
O60244
Source protein:
Mediator of RNA polymerase II transcription subunit 14
Source gene:
MED14
Class:
DEG_SCF_FBW7_1
Location:
1066:1072
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
77.2
COIL:
0.9614
CONS_SCORE:
0.2874
DSS_SCORE:
0.6274
HELIX:
0.012
FCONS_SCORE:
1.0145
RIG_SCORE:
0.5483
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1057W
TCGA-2L-AAQJ
PAAD
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.0833
p.L1057W
DO218949
PAAD
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.0833
p.I1078V
TCGA-5P-A9JY
KIRP
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.1667
p.I1078V
DO223944
KIRP
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.1667
p.A1063V
TCGA-BS-A0TJ
UCEC
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.25
p.A1063V
DO42953
UCEC
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.25
p.H1074R
TCGA-DD-AAVR
LIHC
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.2778
p.H1074R
DO52278
LIHC
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.2778
p.G1081W
TCGA-EE-A29G
SKCM
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.0833
p.G1081W
DO47303
SKCM
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.0833
p.A1082T
TCGA-EO-A22R
UCEC
TCGA
VPTPPPS
DEG_SCF_FBW7_1
0.0556
p.A1082T
DO42713
UCEC
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.0556
p.S1064L
DO52434
COCA
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.2778
p.T1068A
DO33091
PACA
ICGC
VPTPPPS
DEG_SCF_FBW7_1
0.7139
p.G1079V
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
VPTPPPS
DEG_SCF_FBW7_1
0.1389
p.G1079V
RERF-LC-Sq1
lung
COSMIC
VPTPPPS
DEG_SCF_FBW7_1
0.1389
p.G1079V
H513
pleura
COSMIC
VPTPPPS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with MED14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60244
Mediator of RNA polymerase II transcription subunit 14
DEG_SCF_FBW7_1
1066:1072
VPTPPPS
FBXW7
0.9982
More...