DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTPTST
Uniprot ID:
Q14008
Source protein:
Cytoskeleton-associated protein 5
Source gene:
CKAP5
Class:
DEG_SCF_FBW7_1
Location:
1912:1918
E3 ligase:
FBXW7
DEGRON score:
0.9887
ASA_SCORE:
90.6286
COIL:
0.959
CONS_SCORE:
0.2394
DSS_SCORE:
0.5243
HELIX:
0.02
FCONS_SCORE:
1.0411
RIG_SCORE:
0.7278
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C1911Y
TCGA-A5-A0G2
UCEC
TCGA
VPTPTST
DEG_SCF_FBW7_1
0.3056
p.P1913A
TCGA-AN-A0FL
BRCA
TCGA
VPTPTST
DEG_SCF_FBW7_1
0.6392
p.S1923C
DO48449
BLCA
ICGC
VPTPTST
DEG_SCF_FBW7_1
0.1944
p.T1915I
DO10582
COAD
ICGC
VPTPTST
DEG_SCF_FBW7_1
0.7078
p.S1913Y
DO10582
COAD
ICGC
VPTPTST
DEG_SCF_FBW7_1
0.712
p.S1914F
DO45482
LUSC
ICGC
VPTPTST
DEG_SCF_FBW7_1
0.7982
p.P1909S
DO37418
SKCM
ICGC
VPTPTST
DEG_SCF_FBW7_1
0.25
p.P1905S
SIDM01016
T-Lymphoblastic Leukemia
GDSC
VPTPTST
DEG_SCF_FBW7_1
0.1389
p.P1905S
SIDM01263
T-Lymphoblastic Leukemia
GDSC
VPTPTST
DEG_SCF_FBW7_1
0.1389
p.P1905S
ACH-000995
Leukemia
CCLE
VPTPTST
DEG_SCF_FBW7_1
0.1389
p.P1905S
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VPTPTST
DEG_SCF_FBW7_1
0.1389
p.I1922L
SIDM00845
Burkitt's Lymphoma
GDSC
VPTPTST
DEG_SCF_FBW7_1
0.2222
p.I1922L
SIDM01519
Head and Neck Carcinoma
GDSC
VPTPTST
DEG_SCF_FBW7_1
0.2222
p.I1922L
ACH-000786
Lymphoma
CCLE
VPTPTST
DEG_SCF_FBW7_1
0.2222
Drug responses associated with CKAP5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14008
Cytoskeleton-associated protein 5
DEG_SCF_FBW7_1
1912:1918
VPTPTST
FBXW7
0.9887
More...