DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VPVHYD
Uniprot ID:
Q8NEJ9
Source protein:
Neuroguidin
Source gene:
NGDN
Class:
LIG_APCC_ABBA_1
Location:
177:182
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.99
ASA_SCORE:
87.2333
COIL:
0.8708
CONS_SCORE:
0.7968
DSS_SCORE:
0.4795
HELIX:
0.0857
FCONS_SCORE:
0.9936
RIG_SCORE:
0.7679
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V177F
TCGA-66-2791
LUSC
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.5957
p.V177F
DO26435
LUSC
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.5957
p.R188P
TCGA-67-3771
LUAD
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.1667
p.R188P
DO25797
LUAD
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.1667
p.R175H
TCGA-AJ-A3EL
UCEC
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.2778
p.R175H
DO41542
UCEC
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.2778
p.K169N
TCGA-B5-A1MR
UCEC
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.K169N
TCGA-EO-A22U
UCEC
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.K169N
TCGA-EO-A3B0
UCEC
TCGA
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.K169N
DO219773
UCEC
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.K169N
DO41758
UCEC
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.K169N
DO43755
UCEC
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.2222
p.H180Y
DO233764
GACA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.6118
p.E189D
DO228900
LICA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.1389
p.E189D
DO229019
LICA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.1389
p.V172F
DO229035
LICA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.1944
p.V167L
DO229038
LICA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.0556
p.D182Y
DO229037
LICA
ICGC
VPVHYD
LIG_APCC_ABBA_1
0.7325
p.V179I
SIDM00460
B-Cell Non-Hodgkin's Lymphoma
GDSC
VPVHYD
LIG_APCC_ABBA_1
0.5965
p.V179I
ACH-000124
Lymphoma
CCLE
VPVHYD
LIG_APCC_ABBA_1
0.5965
p.V179I
OCI-LY-19
haematopoietic_and_lymphoid_tissue
COSMIC
VPVHYD
LIG_APCC_ABBA_1
0.5965
p.R175C
SIDM00596
Endometrial Carcinoma
GDSC
VPVHYD
LIG_APCC_ABBA_1
0.2778
p.R175C
ACH-001517
Endometrial/Uterine Cancer
CCLE
VPVHYD
LIG_APCC_ABBA_1
0.2778
p.R175C
HEC-1
endometrium
COSMIC
VPVHYD
LIG_APCC_ABBA_1
0.2778
p.E185Q
SIDM01645
Non-Cancerous
GDSC
VPVHYD
LIG_APCC_ABBA_1
0.25
Drug responses associated with NGDN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPVHYD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEJ9
Neuroguidin
LIG_APCC_ABBA_1
177:182
VPVHYD
APC,CDC20,FZR1
0.99
More...