DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPVTPRVS
Uniprot ID:
Q9P2P1
Source protein:
Protein NYNRIN
Source gene:
NYNRIN
Class:
DEG_SCF_FBW7_1
Location:
668:675
E3 ligase:
FBXW7
DEGRON score:
0.9939
ASA_SCORE:
97.8
COIL:
0.961
CONS_SCORE:
0.2378
DSS_SCORE:
0.6261
HELIX:
0.013
FCONS_SCORE:
0.8689
RIG_SCORE:
0.6764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A662S
TCGA-06-5416
GBM
TCGA
VPVTPRVS
DEG_SCF_FBW7_1
0.1667
p.A662S
DO10880
GBM
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.1667
p.K685T
TCGA-F5-6814
READ
TCGA
VPVTPRVS
DEG_SCF_FBW7_1
0.1667
p.K685T
DO36556
READ
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.1667
p.S660F
TCGA-FW-A3R5
SKCM
TCGA
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.S660F
DO37406
SKCM
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.A662V
DO234336
ESAD
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.1667
p.S660P
DO234336
ESAD
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.V668L
DO229019
LICA
ICGC
VPVTPRVS
DEG_SCF_FBW7_1
0.5654
p.V674I
SIDM01307
Colorectal Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.5965
p.S660A
SIDM00481
Ovarian Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.S660A
ACH-000116
Ovarian Cancer
CCLE
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.S660A
OAW-28
ovary
COSMIC
VPVTPRVS
DEG_SCF_FBW7_1
0.5556
p.P678S
SIDM01186
Breast Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.25
p.P678S
ACH-000554
Breast Cancer
CCLE
VPVTPRVS
DEG_SCF_FBW7_1
0.25
p.P678S
UACC-893
breast
COSMIC
VPVTPRVS
DEG_SCF_FBW7_1
0.25
p.T680I
SIDM00444
Esophageal Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.1944
p.T680I
ACH-001368
Esophageal Cancer
CCLE
VPVTPRVS
DEG_SCF_FBW7_1
0.1944
p.T680I
OACM5-1
oesophagus
COSMIC
VPVTPRVS
DEG_SCF_FBW7_1
0.1944
p.A659V
SIDM00954
Breast Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.0833
p.A659V
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.0833
p.A659V
SIDM01752
Pancreatic Carcinoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.0833
p.A659V
SIDM01525
Acute Myeloid Leukemia
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.0833
p.P666S
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.2778
p.P666S
SIDM01525
Acute Myeloid Leukemia
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.2778
p.V668A
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
VPVTPRVS
DEG_SCF_FBW7_1
0.6936
p.A658T
ACH-000960
Leukemia
CCLE
VPVTPRVS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with NYNRIN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPVTPRVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2P1
Protein NYNRIN
DEG_SCF_FBW7_1
668:675
VPVTPRVS
FBXW7
0.9939
More...