DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VPVYEE
Uniprot ID:
Q8IV31
Source protein:
Transmembrane protein 139
Source gene:
TMEM139
Class:
LIG_APCC_ABBA_1
Location:
89:94
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.836
ASA_SCORE:
59.3667
COIL:
0.4943
CONS_SCORE:
0.8582
DSS_SCORE:
0.4619
HELIX:
0.2872
FCONS_SCORE:
1.3594
RIG_SCORE:
0.8057
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R104H
TCGA-AJ-A3BG
UCEC
TCGA
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.R104H
DO42633
UCEC
ICGC
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.V96M
TCGA-HU-A4GP
STAD
TCGA
VPVYEE
LIG_APCC_ABBA_1
0.2778
p.V96M
DO48005
STAD
ICGC
VPVYEE
LIG_APCC_ABBA_1
0.2778
p.G79S
TCGA-MN-A4N4
LUAD
TCGA
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.G79S
DO26250
LUAD
ICGC
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.A95D
DO234168
ESAD
ICGC
VPVYEE
LIG_APCC_ABBA_1
0.3056
p.D83N
DO234171
ESAD
ICGC
VPVYEE
LIG_APCC_ABBA_1
0.1667
p.R104C
SIDM00373
Endometrial Carcinoma
GDSC
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.R104C
ACH-000974
Endometrial/Uterine Cancer
CCLE
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.R104C
ACH-002026
Endometrial/Uterine Cancer
CCLE
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.R104C
SNG-M
endometrium
COSMIC
VPVYEE
LIG_APCC_ABBA_1
0.0556
p.R82W
SIDM00614
Hepatocellular Carcinoma
GDSC
VPVYEE
LIG_APCC_ABBA_1
0.1389
p.R82W
SIDM01148
Plasma Cell Myeloma
GDSC
VPVYEE
LIG_APCC_ABBA_1
0.1389
p.R82W
SIDM01575
Plasma Cell Myeloma
GDSC
VPVYEE
LIG_APCC_ABBA_1
0.1389
p.R82W
JHH-7
liver
COSMIC
VPVYEE
LIG_APCC_ABBA_1
0.1389
p.R82W
NCI-H929
haematopoietic_and_lymphoid_tissue
COSMIC
VPVYEE
LIG_APCC_ABBA_1
0.1389
p.V96A
SIDM00901
Endometrial Carcinoma
GDSC
VPVYEE
LIG_APCC_ABBA_1
0.2778
p.V96A
ACH-000940
Endometrial/Uterine Cancer
CCLE
VPVYEE
LIG_APCC_ABBA_1
0.2778
p.V96A
AN3-CA
endometrium
COSMIC
VPVYEE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with TMEM139 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPVYEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IV31
Transmembrane protein 139
LIG_APCC_ABBA_1
89:94
VPVYEE
APC,CDC20,FZR1
0.836
More...