DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQLFQE
Uniprot ID:
P47989
Source protein:
Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase
Source gene:
XDH
Class:
LIG_APCC_ABBA_1
Location:
558:563
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8564
ASA_SCORE:
70.4167
COIL:
0.4228
CONS_SCORE:
0.2992
DSS_SCORE:
0.61
HELIX:
0.0863
FCONS_SCORE:
1.0101
RIG_SCORE:
0.788
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D557N
TCGA-16-0848
GBM
TCGA
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.D557N
DO229005
COCA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.D557N
DO12196
GBM
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.D557N
SIDM00282
Colorectal Carcinoma
GDSC
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.D557N
SIDM01753
Gastric Carcinoma
GDSC
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.D557N
CW-2
large_intestine
COSMIC
VQLFQE
LIG_APCC_ABBA_1
0.3056
p.Q559H
TCGA-29-1688
OV
TCGA
VQLFQE
LIG_APCC_ABBA_1
0.647
p.Q559H
DO28026
OV
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.647
p.P565S
TCGA-2W-A8YY
CESC
TCGA
VQLFQE
LIG_APCC_ABBA_1
0.2778
p.P565S
DO223732
CESC
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.2778
p.M573I
TCGA-BF-AAOU
SKCM
TCGA
VQLFQE
LIG_APCC_ABBA_1
0.0556
p.M573I
DO219460
SKCM
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.0556
p.Q562K
TCGA-CC-A7IJ
LIHC
TCGA
VQLFQE
LIG_APCC_ABBA_1
0.5833
p.Q562K
DO52183
LIHC
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.5833
p.F550L
DO233819
GACA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.1111
p.P555T
DO228531
LICA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.25
p.L560I
DO229036
LICA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.6063
p.P554S
DO220877
MELA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.2222
p.P554S
DO222632
MELA
ICGC
VQLFQE
LIG_APCC_ABBA_1
0.2222
p.S569C
ACH-001608
Brain Cancer
CCLE
VQLFQE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with XDH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQLFQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P47989
Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase
LIG_APCC_ABBA_1
558:563
VQLFQE
APC,CDC20,FZR1
0.8564
More...