DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQRTPEEE
Uniprot ID:
Q8N4C8
Source protein:
Misshapen-like kinase 1
Source gene:
MINK1
Class:
DEG_SCF_FBW7_2
Location:
888:895
E3 ligase:
FBXW7
DEGRON score:
0.5335
ASA_SCORE:
91.0125
COIL:
0.5824
CONS_SCORE:
0.2788
DSS_SCORE:
0.6461
HELIX:
0.1255
FCONS_SCORE:
0.9888
RIG_SCORE:
0.7671
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R890C
TCGA-D1-A16F
UCEC
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.719
p.R890C
DO222817
BTCA
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.719
p.R890C
DO42408
UCEC
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.719
p.R890H
TCGA-19-1787
GBM
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.R890H
TCGA-CA-6717
COAD
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.R890H
TCGA-KU-A66S
HNSC
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.R890H
DO8264
COAD
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.R890H
DO13522
GBM
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.R890H
DO44456
HNSC
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.7133
p.E893V
SIDM00789
Colorectal Carcinoma
GDSC
VQRTPEEE
DEG_SCF_FBW7_2
0.6582
p.E893V
ACH-000997
Colon/Colorectal Cancer
CCLE
VQRTPEEE
DEG_SCF_FBW7_2
0.6582
p.E893V
ACH-001061
Colon/Colorectal Cancer
CCLE
VQRTPEEE
DEG_SCF_FBW7_2
0.6582
p.E893V
HCT-15
large_intestine
COSMIC
VQRTPEEE
DEG_SCF_FBW7_2
0.6582
p.V888I
TCGA-CV-A45W
HNSC
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.5965
p.V888I
DO52060
HNSC
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.5965
p.T885I
DO229253
THCA
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.25
p.P879S
TCGA-GN-A26C
SKCM
TCGA
VQRTPEEE
DEG_SCF_FBW7_2
0.0833
p.P879S
DO37782
SKCM
ICGC
VQRTPEEE
DEG_SCF_FBW7_2
0.0833
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Drug responses associated with MINK1 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VQRTPEEE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4C8
Misshapen-like kinase 1
DEG_SCF_FBW7_2
888:895
VQRTPEEE
FBXW7
0.5335
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