DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQTPFMT
Uniprot ID:
Q5VWQ0
Source protein:
Lysine-specific demethylase 9
Source gene:
RSBN1
Class:
DEG_SCF_FBW7_1
Location:
333:339
E3 ligase:
FBXW7
DEGRON score:
0.6305
ASA_SCORE:
76.1429
COIL:
0.8149
CONS_SCORE:
0.4557
DSS_SCORE:
0.4829
HELIX:
0.1191
FCONS_SCORE:
0.9122
RIG_SCORE:
0.7356
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R346C
TCGA-A5-A2K5
UCEC
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.R346C
TCGA-AX-A05Z
UCEC
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.R346C
DO40884
UCEC
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.R346C
DO41379
UCEC
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.R347K
TCGA-AJ-A3EK
UCEC
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.1111
p.R347K
DO41584
UCEC
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.1111
p.R347I
TCGA-E6-A1LX
UCEC
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.1111
p.R347I
DO41020
UCEC
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.1111
p.R346H
TCGA-E6-A1LX
UCEC
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.R346H
DO41020
UCEC
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.1389
p.P336L
TCGA-EE-A2GH
SKCM
TCGA
VQTPFMT
DEG_SCF_FBW7_1
0.7582
p.P336L
DO37643
SKCM
ICGC
VQTPFMT
DEG_SCF_FBW7_1
0.7582
p.L325F
Hs939-T
skin
COSMIC
VQTPFMT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with RSBN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQTPFMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VWQ0
Lysine-specific demethylase 9
DEG_SCF_FBW7_1
333:339
VQTPFMT
FBXW7
0.6305
More...