DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQVTPQLE
Uniprot ID:
P98160
Source protein:
Basement membrane-specific heparan sulfate proteoglycan core protein
Source gene:
HSPG2
Class:
DEG_SCF_FBW7_2
Location:
3402:3409
E3 ligase:
FBXW7
DEGRON score:
0.7549
ASA_SCORE:
75.2625
COIL:
0.4856
CONS_SCORE:
0.375
DSS_SCORE:
0.5013
HELIX:
0.0084
FCONS_SCORE:
1.1414
RIG_SCORE:
0.7638
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E3418V
TCGA-19-1790
GBM
TCGA
VQVTPQLE
DEG_SCF_FBW7_2
0.0833
p.E3418V
DO12328
GBM
ICGC
VQVTPQLE
DEG_SCF_FBW7_2
0.0833
p.V3402M
TCGA-F4-6808
COAD
TCGA
VQVTPQLE
DEG_SCF_FBW7_2
0.6097
p.V3402M
DO8946
COAD
ICGC
VQVTPQLE
DEG_SCF_FBW7_2
0.6097
p.F3419L
DO44810
LICA
ICGC
VQVTPQLE
DEG_SCF_FBW7_2
0.0556
p.P3395S
DO232761
PBCA
ICGC
VQVTPQLE
DEG_SCF_FBW7_2
0.1389
p.P3395S
ACH-000423
Skin Cancer
CCLE
VQVTPQLE
DEG_SCF_FBW7_2
0.1389
p.S3412G
SIDM01004
Chronic Myelogenous Leukemia
GDSC
VQVTPQLE
DEG_SCF_FBW7_2
0.25
Drug responses associated with HSPG2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQVTPQLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_SCF_FBW7_2
3402:3409
VQVTPQLE
FBXW7
0.7549
More...