DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VRDLLPTVN
Uniprot ID:
Q6PGN9
Source protein:
Proline/serine-rich coiled-coil protein 1
Source gene:
PSRC1
Class:
DEG_APCC_DBOX_1
Location:
124:132
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9991
ASA_SCORE:
76.6556
COIL:
0.7849
CONS_SCORE:
0.9591
DSS_SCORE:
0.5379
HELIX:
0.1628
FCONS_SCORE:
1.0703
RIG_SCORE:
0.7399
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R114W
TCGA-AA-3715
COAD
TCGA
VRDLLPTVN
DEG_APCC_DBOX_1
0.0556
p.R114W
DO8018
COAD
ICGC
VRDLLPTVN
DEG_APCC_DBOX_1
0.0556
p.T130I
TCGA-BR-4368
STAD
TCGA
VRDLLPTVN
DEG_APCC_DBOX_1
0.5966
p.T130I
DO38715
STAD
ICGC
VRDLLPTVN
DEG_APCC_DBOX_1
0.5966
p.P141S
TCGA-EE-A29E
SKCM
TCGA
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
p.P141S
DO37831
SKCM
ICGC
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
p.R136W
DO233270
GACA
ICGC
VRDLLPTVN
DEG_APCC_DBOX_1
0.2222
p.L127M
DO228971
LICA
ICGC
VRDLLPTVN
DEG_APCC_DBOX_1
0.5999
p.E115Q
SIDM00951
T-Lymphoblastic Leukemia
GDSC
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
p.E115Q
ACH-001737
Leukemia
CCLE
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
p.E115Q
ACH-002222
Leukemia
CCLE
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
p.E115Q
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
VRDLLPTVN
DEG_APCC_DBOX_1
0.0833
Drug responses associated with PSRC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRDLLPTVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PGN9
Proline/serine-rich coiled-coil protein 1
DEG_APCC_DBOX_1
124:132
VRDLLPTVN
APC,CDC20,FZR1
0.9991
More...