DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VRFFLGDLC
Uniprot ID:
Q15738
Source protein:
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Source gene:
NSDHL
Class:
DEG_APCC_DBOX_1
Location:
78:86
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6839
ASA_SCORE:
31.6333
COIL:
0.4398
CONS_SCORE:
0.525
DSS_SCORE:
0.0983
HELIX:
0.0211
FCONS_SCORE:
1.281
RIG_SCORE:
0.9145
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y92H
TCGA-2W-A8YY
CESC
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.1667
p.Y92H
DO223732
CESC
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.1667
p.Q77H
TCGA-97-7546
LUAD
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.3056
p.Q77H
DO23762
LUAD
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.3056
p.R79W
TCGA-AP-A051
UCEC
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.8634
p.R79W
DO232224
PBCA
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.8634
p.R79W
DO42673
UCEC
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.8634
p.L85I
TCGA-AP-A059
UCEC
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.6063
p.L85I
DO41361
UCEC
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.6063
p.N75K
TCGA-BR-6452
STAD
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.25
p.N75K
DO38404
STAD
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.25
p.D68H
TCGA-C5-A2LS
CESC
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.0556
p.D68H
DO49879
CESC
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.0556
p.L85H
TCGA-CK-4951
COAD
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.7313
p.L85H
DO10582
COAD
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.7313
p.R88Q
TCGA-OL-A5S0
BRCA
TCGA
VRFFLGDLC
DEG_APCC_DBOX_1
0.2778
p.R88Q
DO44155
BRCA
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.2778
p.C86F
DO229029
LICA
ICGC
VRFFLGDLC
DEG_APCC_DBOX_1
0.5996
p.F80L
ACH-000993
Endometrial/Uterine Cancer
CCLE
VRFFLGDLC
DEG_APCC_DBOX_1
0.587
Drug responses associated with NSDHL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRFFLGDLC
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15738
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
DEG_APCC_DBOX_1
78:86
VRFFLGDLC
APC,CDC20,FZR1
0.6839
More...