DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRFLLGPME
Uniprot ID:
O95900
Source protein:
Pseudouridylate synthase TRUB2, mitochondrial
Source gene:
TRUB2
Class:
DEG_APCC_DBOX_1
Location:
50:58
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.981
ASA_SCORE:
77.6222
COIL:
0.6922
CONS_SCORE:
0.2571
DSS_SCORE:
0.5172
HELIX:
0.0382
FCONS_SCORE:
0.9222
RIG_SCORE:
0.7435
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R51C
TCGA-22-4594
LUSC
TCGA
VRFLLGPME
DEG_APCC_DBOX_1
0.8301
p.R51C
DO222884
COCA
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.8301
p.R51C
DO27476
LUSC
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.8301
p.A45T
TCGA-AG-A02N
READ
TCGA
VRFLLGPME
DEG_APCC_DBOX_1
0.1944
p.A45T
DO37146
READ
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.1944
p.K42R
TCGA-CZ-4863
KIRC
TCGA
VRFLLGPME
DEG_APCC_DBOX_1
0.2222
p.K42R
DO18691
KIRC
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.2222
p.R51H
TCGA-EO-A3B0
UCEC
TCGA
VRFLLGPME
DEG_APCC_DBOX_1
0.8244
p.R51H
DO219773
UCEC
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.8244
p.R49H
TCGA-IB-7651
PAAD
TCGA
VRFLLGPME
DEG_APCC_DBOX_1
0.3056
p.R49H
DO46657
PAAD
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.3056
p.P43L
DO228335
EOPC
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.1389
p.P56S
DO234271
ESAD
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.5641
p.L54M
DO229037
LICA
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.711
p.P46H
DO229045
LICA
ICGC
VRFLLGPME
DEG_APCC_DBOX_1
0.2222
p.P43T
SIDM00724
Non-Small Cell Lung Carcinoma
GDSC
VRFLLGPME
DEG_APCC_DBOX_1
0.1389
p.P43T
SIDM01128
Small Cell Lung Carcinoma
GDSC
VRFLLGPME
DEG_APCC_DBOX_1
0.1389
p.R49C
SIDM01617
Endometrial Carcinoma
GDSC
VRFLLGPME
DEG_APCC_DBOX_1
0.3056
p.R49C
ACH-000994
Endometrial/Uterine Cancer
CCLE
VRFLLGPME
DEG_APCC_DBOX_1
0.3056
p.S60G
ACH-001607
Gallbladder Cancer
CCLE
VRFLLGPME
DEG_APCC_DBOX_1
0.2778
Drug responses associated with TRUB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRFLLGPME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95900
Pseudouridylate synthase TRUB2, mitochondrial
DEG_APCC_DBOX_1
50:58
VRFLLGPME
APC,CDC20,FZR1
0.981
More...