DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRGDLQPVI
Uniprot ID:
Q5TBE3
Source protein:
Uncharacterized protein C9orf153
Source gene:
C9orf153
Class:
DEG_APCC_DBOX_1
Location:
72:80
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8076
ASA_SCORE:
70.9889
COIL:
0.6227
CONS_SCORE:
0.6139
DSS_SCORE:
0.4487
HELIX:
0.0386
FCONS_SCORE:
1.1087
RIG_SCORE:
0.7544
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S65T
TCGA-25-2404
OV
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.1389
p.S65T
DO32049
OV
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.1389
p.R73S
TCGA-34-5236
LUSC
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.7427
p.R73S
DO26778
LUSC
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.7427
p.G74V
TCGA-63-A5MS
LUSC
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.6421
p.G74V
DO219161
LUSC
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.6421
p.L76F
TCGA-D1-A17Q
UCEC
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.6981
p.L76F
DO41903
UCEC
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.6981
p.F66L
TCGA-HQ-A5NE
BLCA
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.1667
p.F66L
DO51900
BLCA
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.1667
p.D71N
TCGA-MF-A522
LUSC
TCGA
VRGDLQPVI
DEG_APCC_DBOX_1
0.3056
p.D71N
DO45526
LUSC
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.3056
p.A70S
DO228278
LICA
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.2778
p.Q77K
DO228948
LICA
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.5833
p.K88N
DO45277
LIRI
ICGC
VRGDLQPVI
DEG_APCC_DBOX_1
0.1111
Drug responses associated with C9orf153 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRGDLQPVI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TBE3
Uncharacterized protein C9orf153
DEG_APCC_DBOX_1
72:80
VRGDLQPVI
APC,CDC20,FZR1
0.8076
More...