DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRGRLSGIE
Uniprot ID:
Q01082
Source protein:
Spectrin beta chain, non-erythrocytic 1
Source gene:
SPTBN1
Class:
DEG_APCC_DBOX_1
Location:
820:828
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7416
ASA_SCORE:
50.3222
COIL:
0.0414
CONS_SCORE:
0.4689
DSS_SCORE:
0.4761
HELIX:
0.9566
FCONS_SCORE:
1.0321
RIG_SCORE:
0.6793
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D819E
TCGA-DJ-A2PU
THCA
TCGA
VRGRLSGIE
DEG_APCC_DBOX_1
0.3056
p.D819E
DO40429
THCA
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.3056
p.R830W
TCGA-HU-A4G9
STAD
TCGA
VRGRLSGIE
DEG_APCC_DBOX_1
0.2778
p.R830W
DO228587
MALY
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.2778
p.R830W
DO47789
STAD
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.2778
p.R823W
DO222804
COCA
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.7523
p.A835S
DO229025
LICA
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.1389
p.R830L
DO229470
SKCA
ICGC
VRGRLSGIE
DEG_APCC_DBOX_1
0.2778
p.T838M
SIDM00324
Neuroblastoma
GDSC
VRGRLSGIE
DEG_APCC_DBOX_1
0.5
p.T838M
ACH-001674
Neuroblastoma
CCLE
VRGRLSGIE
DEG_APCC_DBOX_1
0.5
p.T838M
TGW
autonomic_ganglia
COSMIC
VRGRLSGIE
DEG_APCC_DBOX_1
0.5
p.R821K
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
VRGRLSGIE
DEG_APCC_DBOX_1
0.7237
p.R821K
ACH-000878
Lung Cancer
CCLE
VRGRLSGIE
DEG_APCC_DBOX_1
0.7237
p.R821K
HCC-15
lung
COSMIC
VRGRLSGIE
DEG_APCC_DBOX_1
0.7237
p.Y831H
ACH-000998
Colon/Colorectal Cancer
CCLE
VRGRLSGIE
DEG_APCC_DBOX_1
0.6944
p.Y831H
CW-2
large_intestine
COSMIC
VRGRLSGIE
DEG_APCC_DBOX_1
0.6944
p.P811S
ACH-001970
Metastasis
CCLE
VRGRLSGIE
DEG_APCC_DBOX_1
0.0833
p.Y818H
CW-2
large_intestine
COSMIC
VRGRLSGIE
DEG_APCC_DBOX_1
0.2778
p.T825M
TGW
autonomic_ganglia
COSMIC
VRGRLSGIE
DEG_APCC_DBOX_1
0.7423
Drug responses associated with SPTBN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRGRLSGIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01082
Spectrin beta chain, non-erythrocytic 1
DEG_APCC_DBOX_1
820:828
VRGRLSGIE
APC,CDC20,FZR1
0.7416
More...