DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRGTLAYLP
Uniprot ID:
P51617
Source protein:
Interleukin-1 receptor-associated kinase 1
Source gene:
IRAK1
Class:
DEG_APCC_DBOX_1
Location:
384:392
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7146
ASA_SCORE:
31.9444
COIL:
0.6216
CONS_SCORE:
0.6052
DSS_SCORE:
0.246
HELIX:
0.0519
FCONS_SCORE:
1.3008
RIG_SCORE:
0.8349
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S376R
TCGA-21-1083
LUSC
TCGA
VRGTLAYLP
DEG_APCC_DBOX_1
0.5556
p.L388M
TCGA-BS-A0V8
UCEC
TCGA
VRGTLAYLP
DEG_APCC_DBOX_1
0.711
p.T381S
TCGA-CK-4947
COAD
TCGA
VRGTLAYLP
DEG_APCC_DBOX_1
0.6944
p.L391V
TCGA-L5-A4OW
ESCA
TCGA
VRGTLAYLP
DEG_APCC_DBOX_1
0.5654
p.D375Y
DO227942
BRCA
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.5278
p.K381N
DO228957
LICA
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.6944
p.S399R
DO219517
LIHC
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.1389
p.G395V
DO231641
LINC
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.25
p.S402R
DO26769
LUSC
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.0556
p.G386C
DO220886
MELA
ICGC
VRGTLAYLP
DEG_APCC_DBOX_1
0.6489
p.E393K
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
VRGTLAYLP
DEG_APCC_DBOX_1
0.3056
p.E393K
ACH-000916
Lung Cancer
CCLE
VRGTLAYLP
DEG_APCC_DBOX_1
0.3056
p.E393K
NCI-H1573
lung
COSMIC
VRGTLAYLP
DEG_APCC_DBOX_1
0.3056
Drug responses associated with IRAK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00749
LUAD|lung_NSCLC_adenocarcinoma
p.E393K (Yes)
GDSC
WZ3105
16.7536
SIDM00095
GBM|glioma
p.R366C (No)
GDSC
WZ3105
0.6666
SIDM00932
KIRC|kidney
p.V642M (No)
GDSC
WZ3105
4.9105
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.P658L (No)
GDSC
WZ3105
24.2807
SIDM00212
GBM|glioma
p.V642M (No)
GDSC
WZ3105
0.9105
SIDM01090
COREAD|large_intestine
p.C203S (No)
GDSC
WZ3105
0.2097
SIDM00529
BRCA|breast
p.P173L (No)
GDSC
WZ3105
0.5606
SIDM00756
LUAD|lung_NSCLC_adenocarcinoma
p.S690G (No)
GDSC
WZ3105
25.4931
SIDM01186
BRCA|breast
p.P162S (No)
GDSC
WZ3105
0.4924
SIDM00530
ESCA|oesophagus
p.V586M (No)
GDSC
WZ3105
0.5288
SIDM00217
COREAD|large_intestine
p.L437P (No)
GDSC
WZ3105
0.1618
SIDM00807
BLCA|bladder
p.P173L (No)
GDSC
WZ3105
0.2911
SIDM00396
LAML|acute_myeloid_leukaemia
p.R366C (No)
GDSC
WZ3105
0.0764
SIDM00274
STAD|stomach
p.E516K (No)
GDSC
WZ3105
18.5283
SIDM00426
UNCLASSIFIED|rhabdomyosarcoma
p.T152S (No)
GDSC
WZ3105
0.5116
SIDM00567
MB|medulloblastoma
p.V188F (No)
GDSC
WZ3105
0.118
SIDM01140
UNCLASSIFIED|ovary
p.P173L (No)
GDSC
WZ3105
0.213
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.R69fs*6 (No)
GDSC
WZ3105
1.6705
SIDM01183
UNCLASSIFIED|lung_NSCLC_carcinoid
p.A651V (No)
GDSC
WZ3105
0.7103
SIDM00128
HNSC|head_and_neck
p.G530R (No)
GDSC
WZ3105
0.3456
SIDM01004
LCML|chronic_myeloid_leukaemia
p.L493_G494delLG (No)
GDSC
WZ3105
0.1956
SIDM00382
GBM|glioma
p.P218fs*68 (No)
GDSC
WZ3105
27.5385
SIDM00555
GBM|glioma
p.V586M (No)
GDSC
WZ3105
0.1686
SIDM00092
OV|ovary
p.S607R (No)
GDSC
WZ3105
1.9954
SIDM00048
LUAD|lung_NSCLC_adenocarcinoma
p.R194H (No)
GDSC
WZ3105
0.4596
SIDM00654
SCLC|lung_small_cell_carcinoma
p.R187Q (No)
GDSC
WZ3105
0.262
SIDM00579
NB|neuroblastoma
p.D169G (No)
GDSC
WZ3105
18.1424
SIDM00118
COREAD|large_intestine
p.V642A (No)
GDSC
WZ3105
0.4527
All proteins holding degron of VRGTLAYLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51617
Interleukin-1 receptor-associated kinase 1
DEG_APCC_DBOX_1
384:392
VRGTLAYLP
APC,CDC20,FZR1
0.7146
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