DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKALPELY
Uniprot ID:
O95502
Source protein:
Neuronal pentraxin receptor
Source gene:
NPTXR
Class:
DEG_APCC_DBOX_1
Location:
309:317
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7603
ASA_SCORE:
73.1333
COIL:
0.7663
CONS_SCORE:
0.6683
DSS_SCORE:
0.0407
HELIX:
0.0194
FCONS_SCORE:
0.9424
RIG_SCORE:
0.909
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V309M
TCGA-A5-A0G1
UCEC
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.V309M
TCGA-AG-3902
READ
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.V309M
DO234230
ESAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.V309M
DO233888
GACA
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.V309M
DO36407
READ
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.V309M
DO42472
UCEC
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.6097
p.A312T
TCGA-AB-2938
LAML
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.6028
p.A312T
DO21085
LAML
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.6028
p.R310Q
TCGA-BR-7703
STAD
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.7329
p.R310Q
DO38232
STAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.7329
p.A321T
TCGA-BR-8078
STAD
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.A321T
DO234453
ESAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.A321T
DO38288
STAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.N303S
TCGA-D1-A15X
UCEC
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.1667
p.N303S
DO43274
UCEC
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.1667
p.A307D
TCGA-DD-A4NS
LIHC
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.2778
p.A307D
DO45017
LIHC
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.2778
p.R310W
TCGA-EY-A1G8
UCEC
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.8634
p.R310W
DO233272
GACA
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.8634
p.R310W
DO43578
UCEC
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.8634
p.M305I
TCGA-XK-AAIW
PRAD
TCGA
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.M305I
DO234408
ESAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.M305I
DO51407
PRAD
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.2222
p.R326W
DO233259
GACA
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.0833
p.T320A
DO229234
THCA
ICGC
VRKALPELY
DEG_APCC_DBOX_1
0.25
p.M323T
SIDM00425
Ovarian Carcinoma
GDSC
VRKALPELY
DEG_APCC_DBOX_1
0.1667
p.M323T
ACH-000663
Ovarian Cancer
CCLE
VRKALPELY
DEG_APCC_DBOX_1
0.1667
p.R308C
SIDM01088
Endometrial Carcinoma
GDSC
VRKALPELY
DEG_APCC_DBOX_1
0.3056
p.R308C
ACH-000965
Endometrial/Uterine Cancer
CCLE
VRKALPELY
DEG_APCC_DBOX_1
0.3056
p.R308C
RL95-2
endometrium
COSMIC
VRKALPELY
DEG_APCC_DBOX_1
0.3056
p.S327F
SIDM00003
Melanoma
GDSC
VRKALPELY
DEG_APCC_DBOX_1
0.0556
p.S327F
ACH-000884
Skin Cancer
CCLE
VRKALPELY
DEG_APCC_DBOX_1
0.0556
p.S327F
ACH-002159
Skin Cancer
CCLE
VRKALPELY
DEG_APCC_DBOX_1
0.0556
p.S327F
M14
skin
COSMIC
VRKALPELY
DEG_APCC_DBOX_1
0.0556
Drug responses associated with NPTXR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKALPELY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95502
Neuronal pentraxin receptor
DEG_APCC_DBOX_1
309:317
VRKALPELY
APC,CDC20,FZR1
0.7603
More...