DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKALVGLS
Uniprot ID:
P28331
Source protein:
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Source gene:
NDUFS1
Class:
DEG_APCC_DBOX_1
Location:
6:14
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9126
ASA_SCORE:
89.2778
COIL:
0.735
CONS_SCORE:
0.181
DSS_SCORE:
0.3279
HELIX:
0.2339
FCONS_SCORE:
0.9707
RIG_SCORE:
0.7979
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I18K
TCGA-D1-A1NZ
UCEC
TCGA
VRKALVGLS
DEG_APCC_DBOX_1
0.3333
p.G12C
DO9756
COAD
ICGC
VRKALVGLS
DEG_APCC_DBOX_1
0.6489
p.R22Q
DO219896
DLBC
ICGC
VRKALVGLS
DEG_APCC_DBOX_1
0.1111
p.R22Q
DO41379
UCEC
ICGC
VRKALVGLS
DEG_APCC_DBOX_1
0.1111
p.I4K
DO41536
UCEC
ICGC
VRKALVGLS
DEG_APCC_DBOX_1
0.7222
p.K15E
ACH-002014
Eye Cancer
CCLE
VRKALVGLS
DEG_APCC_DBOX_1
0.75
p.K15E
ACH-002018
Eye Cancer
CCLE
VRKALVGLS
DEG_APCC_DBOX_1
0.75
p.C17F
NCI-H1299
lung
COSMIC
VRKALVGLS
DEG_APCC_DBOX_1
0.25
p.C12F
NCI-H1299
lung
COSMIC
VRKALVGLS
DEG_APCC_DBOX_1
0.7108
Drug responses associated with NDUFS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKALVGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28331
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
DEG_APCC_DBOX_1
6:14
VRKALVGLS
APC,CDC20,FZR1
0.9126
More...