DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKELQELQ
Uniprot ID:
Q9NXG0
Source protein:
Centlein
Source gene:
CNTLN
Class:
DEG_APCC_DBOX_1
Location:
327:335
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6488
ASA_SCORE:
103.8
COIL:
0.0139
CONS_SCORE:
0.5289
DSS_SCORE:
0.2017
HELIX:
0.9859
FCONS_SCORE:
1.3023
RIG_SCORE:
0.8491
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D323Y
TCGA-AX-A1CE
UCEC
TCGA
VRKELQELQ
DEG_APCC_DBOX_1
0.2222
p.D323Y
DO42280
UCEC
ICGC
VRKELQELQ
DEG_APCC_DBOX_1
0.2222
p.Q319P
TCGA-AX-A2HC
UCEC
TCGA
VRKELQELQ
DEG_APCC_DBOX_1
0.1111
p.Q319P
DO41572
UCEC
ICGC
VRKELQELQ
DEG_APCC_DBOX_1
0.1111
p.K329N
TCGA-AX-A2HC
UCEC
TCGA
VRKELQELQ
DEG_APCC_DBOX_1
0.5806
p.L317R
TCGA-D7-6528
STAD
TCGA
VRKELQELQ
DEG_APCC_DBOX_1
0.0556
p.L317R
DO38547
STAD
ICGC
VRKELQELQ
DEG_APCC_DBOX_1
0.0556
p.L317R
SIDM02010
Esophageal Carcinoma
GDSC
VRKELQELQ
DEG_APCC_DBOX_1
0.0556
p.L317P
DO233854
GACA
ICGC
VRKELQELQ
DEG_APCC_DBOX_1
0.0556
p.E330Q
DO25104
LUAD
ICGC
VRKELQELQ
DEG_APCC_DBOX_1
0.5633
p.K320M
SIDM01259
B-Lymphoblastic Leukemia
GDSC
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.K320M
ACH-002238
Leukemia
CCLE
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.K320M
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.Y338H
SIDM01186
Breast Carcinoma
GDSC
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.Y338H
ACH-000554
Breast Cancer
CCLE
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.Y338H
UACC-893
breast
COSMIC
VRKELQELQ
DEG_APCC_DBOX_1
0.25
p.R328W
SIDM00278
Esophageal Squamous Cell Carcinoma
GDSC
VRKELQELQ
DEG_APCC_DBOX_1
0.8634
p.R328W
ACH-000305
Esophageal Cancer
CCLE
VRKELQELQ
DEG_APCC_DBOX_1
0.8634
p.R328W
EC-GI-10
oesophagus
COSMIC
VRKELQELQ
DEG_APCC_DBOX_1
0.8634
p.S342I
SIDM00927
Small Cell Lung Carcinoma
GDSC
VRKELQELQ
DEG_APCC_DBOX_1
0.1389
p.S342I
ACH-000871
Lung Cancer
CCLE
VRKELQELQ
DEG_APCC_DBOX_1
0.1389
p.S342I
NCI-H510A
lung
COSMIC
VRKELQELQ
DEG_APCC_DBOX_1
0.1389
Drug responses associated with CNTLN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKELQELQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NXG0
Centlein
DEG_APCC_DBOX_1
327:335
VRKELQELQ
APC,CDC20,FZR1
0.6488
More...