DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKLLLLIP
Uniprot ID:
Q9UPU5
Source protein:
Ubiquitin carboxyl-terminal hydrolase 24
Source gene:
USP24
Class:
DEG_APCC_DBOX_1
Location:
1101:1109
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.732
ASA_SCORE:
48.3111
COIL:
0.337
CONS_SCORE:
0.5777
DSS_SCORE:
0.0455
HELIX:
0.6567
FCONS_SCORE:
1.4247
RIG_SCORE:
0.9087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1102W
TCGA-AP-A0LM
UCEC
TCGA
VRKLLLLIP
DEG_APCC_DBOX_1
0.8634
p.R1102W
TCGA-E6-A1LX
UCEC
TCGA
VRKLLLLIP
DEG_APCC_DBOX_1
0.8634
p.R1102L
TCGA-EE-A17Z
SKCM
TCGA
VRKLLLLIP
DEG_APCC_DBOX_1
0.8428
p.D1103Y
DO24780
LUAD
ICGC
VRKLLLLIP
DEG_APCC_DBOX_1
0.7325
Drug responses associated with USP24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKLLLLIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPU5
Ubiquitin carboxyl-terminal hydrolase 24
DEG_APCC_DBOX_1
1101:1109
VRKLLLLIP
APC,CDC20,FZR1
0.732
More...