DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKPLEAVL
Uniprot ID:
Q13330
Source protein:
Metastasis-associated protein MTA1
Source gene:
MTA1
Class:
DEG_APCC_DBOX_1
Location:
530:538
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8454
ASA_SCORE:
67.2111
COIL:
0.406
CONS_SCORE:
0.418
DSS_SCORE:
0.3021
HELIX:
0.5616
FCONS_SCORE:
1.0211
RIG_SCORE:
0.7858
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R531C
TCGA-AA-A01R
COAD
TCGA
VRKPLEAVL
DEG_APCC_DBOX_1
0.8301
p.R531C
ACH-000963
Colon/Colorectal Cancer
CCLE
VRKPLEAVL
DEG_APCC_DBOX_1
0.8301
p.V536M
ACH-000960
Leukemia
CCLE
VRKPLEAVL
DEG_APCC_DBOX_1
0.7208
p.V536M
REH
haematopoietic_and_lymphoid_tissue
COSMIC
VRKPLEAVL
DEG_APCC_DBOX_1
0.7208
p.V537M
SIDM02039
Colorectal Carcinoma
GDSC
VRKPLEAVL
DEG_APCC_DBOX_1
0.6097
p.K532Q
DO229218
THCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.5833
p.K532Q
DO229221
THCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.5833
p.R522Q
DO43755
UCEC
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.5556
p.S520F
TCGA-DD-AACQ
LIHC
TCGA
VRKPLEAVL
DEG_APCC_DBOX_1
0.5
p.V520M
DO229085
THCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.5
p.V520M
DO42825
UCEC
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.5
p.R539Q
TCGA-EO-A22U
UCEC
TCGA
VRKPLEAVL
DEG_APCC_DBOX_1
0.3056
p.R546P
DO229211
THCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.1111
p.T547M
DO561
BLCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.0833
p.T547M
DO230326
COCA
ICGC
VRKPLEAVL
DEG_APCC_DBOX_1
0.0833
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Drug responses associated with MTA1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VRKPLEAVL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13330
Metastasis-associated protein MTA1
DEG_APCC_DBOX_1
530:538
VRKPLEAVL
APC,CDC20,FZR1
0.8454
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