DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKRLNELR
Uniprot ID:
Q15154
Source protein:
Pericentriolar material 1 protein
Source gene:
PCM1
Class:
DEG_APCC_DBOX_1
Location:
496:504
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6836
ASA_SCORE:
110.3222
COIL:
0.0606
CONS_SCORE:
0.7608
DSS_SCORE:
0.3775
HELIX:
0.9421
FCONS_SCORE:
1.2213
RIG_SCORE:
0.7835
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R497Q
TCGA-BK-A6W3
UCEC
TCGA
VRKRLNELR
DEG_APCC_DBOX_1
0.7329
p.R497Q
DO229058
LICA
ICGC
VRKRLNELR
DEG_APCC_DBOX_1
0.7329
p.R497Q
DO50076
UCEC
ICGC
VRKRLNELR
DEG_APCC_DBOX_1
0.7329
p.N494S
DO229211
THCA
ICGC
VRKRLNELR
DEG_APCC_DBOX_1
0.2778
p.E502D
SIDM02035
Colorectal Carcinoma
GDSC
VRKRLNELR
DEG_APCC_DBOX_1
0.5647
p.K489R
SIDM00537
Colorectal Carcinoma
GDSC
VRKRLNELR
DEG_APCC_DBOX_1
0.5833
p.K489R
ACH-001345
Colon/Colorectal Cancer
CCLE
VRKRLNELR
DEG_APCC_DBOX_1
0.5833
p.K489R
GP5d
large_intestine
COSMIC
VRKRLNELR
DEG_APCC_DBOX_1
0.5833
p.R504S
SIDM00201
Ewing's Sarcoma
GDSC
VRKRLNELR
DEG_APCC_DBOX_1
0.6316
p.R504S
ACH-002119
Bone Cancer
CCLE
VRKRLNELR
DEG_APCC_DBOX_1
0.6316
p.R504S
EW-7
bone
COSMIC
VRKRLNELR
DEG_APCC_DBOX_1
0.6316
p.T513A
ACH-000982
Colon/Colorectal Cancer
CCLE
VRKRLNELR
DEG_APCC_DBOX_1
0.0833
p.S502L
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
VRKRLNELR
DEG_APCC_DBOX_1
0.7667
Drug responses associated with PCM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKRLNELR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15154
Pericentriolar material 1 protein
DEG_APCC_DBOX_1
496:504
VRKRLNELR
APC,CDC20,FZR1
0.6836
More...