DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRKVLKPIQ
Uniprot ID:
Q9Y2P8
Source protein:
RNA 3'-terminal phosphate cyclase-like protein
Source gene:
RCL1
Class:
DEG_APCC_DBOX_1
Location:
173:181
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9359
ASA_SCORE:
81.6333
COIL:
0.6864
CONS_SCORE:
0.4201
DSS_SCORE:
0.2743
HELIX:
0.032
FCONS_SCORE:
0.7372
RIG_SCORE:
0.8588
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P172H
TCGA-DJ-A2QB
THCA
TCGA
VRKVLKPIQ
DEG_APCC_DBOX_1
0.3056
p.P172H
DO39421
THCA
ICGC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.3056
p.E166K
TCGA-EO-A22U
UCEC
TCGA
VRKVLKPIQ
DEG_APCC_DBOX_1
0.1389
p.E166K
DO43755
UCEC
ICGC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.1389
p.V173M
TCGA-KK-A6E2
PRAD
TCGA
VRKVLKPIQ
DEG_APCC_DBOX_1
0.6097
p.V173M
DO51356
PRAD
ICGC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.6097
p.C163F
DO229027
LICA
ICGC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.0556
p.D168N
EVSA-T
breast
COSMIC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.1944
p.I191M
NCI-H446
lung
COSMIC
VRKVLKPIQ
DEG_APCC_DBOX_1
0.0556
Drug responses associated with RCL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRKVLKPIQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2P8
RNA 3'-terminal phosphate cyclase-like protein
DEG_APCC_DBOX_1
173:181
VRKVLKPIQ
APC,CDC20,FZR1
0.9359
More...