DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRLGLPLLT
Uniprot ID:
P55199
Source protein:
RNA polymerase II elongation factor ELL
Source gene:
ELL
Class:
DEG_APCC_DBOX_1
Location:
423:431
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9675
ASA_SCORE:
88.1
COIL:
0.8091
CONS_SCORE:
0.3493
DSS_SCORE:
0.5536
HELIX:
0.1128
FCONS_SCORE:
0.9941
RIG_SCORE:
0.7448
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L425I
TCGA-2W-A8YY
CESC
TCGA
VRLGLPLLT
DEG_APCC_DBOX_1
0.6063
p.L429P
TCGA-EY-A1H0
UCEC
TCGA
VRLGLPLLT
DEG_APCC_DBOX_1
0.6471
p.T437I
DO234344
ESAD
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.6111
p.I413T
DO233885
GACA
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.0556
p.T418I
DO222595
MELA
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.1944
p.R415Q
DO37591
SKCM
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.1111
p.R425W
DO37819
SKCM
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.8634
p.R425W
DO41380
UCEC
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.8634
p.L427F
DO37719
SKCM
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.6981
p.R415W
DO47817
STAD
ICGC
VRLGLPLLT
DEG_APCC_DBOX_1
0.1111
p.E415Q
SIDM00234
Other Solid Cancers
GDSC
VRLGLPLLT
DEG_APCC_DBOX_1
0.1111
p.R424C
SIDM00696
Non-Cancerous
GDSC
VRLGLPLLT
DEG_APCC_DBOX_1
0.8301
p.G426S
SIDM00402
Bladder Carcinoma
GDSC
VRLGLPLLT
DEG_APCC_DBOX_1
0.5882
p.A434V
SIDM00500
Colorectal Carcinoma
GDSC
VRLGLPLLT
DEG_APCC_DBOX_1
0.25
p.Q426R
NCI-H2342
lung
COSMIC
VRLGLPLLT
DEG_APCC_DBOX_1
0.7329
Drug responses associated with ELL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRLGLPLLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55199
RNA polymerase II elongation factor ELL
DEG_APCC_DBOX_1
423:431
VRLGLPLLT
APC,CDC20,FZR1
0.9675
More...