DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRLGLPPVP
Uniprot ID:
Q96RT7
Source protein:
Gamma-tubulin complex component 6
Source gene:
TUBGCP6
Class:
DEG_APCC_DBOX_1
Location:
228:236
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.962
ASA_SCORE:
66.1111
COIL:
0.8489
CONS_SCORE:
0.4948
DSS_SCORE:
0.3546
HELIX:
0.0606
FCONS_SCORE:
1.1573
RIG_SCORE:
0.7536
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T223I
TCGA-IB-7651
PAAD
TCGA
VRLGLPPVP
DEG_APCC_DBOX_1
0.1944
p.T223I
DO46657
PAAD
ICGC
VRLGLPPVP
DEG_APCC_DBOX_1
0.1944
p.A239V
TCGA-LG-A6GG
LIHC
TCGA
VRLGLPPVP
DEG_APCC_DBOX_1
0.25
p.A239V
DO49699
LIHC
ICGC
VRLGLPPVP
DEG_APCC_DBOX_1
0.25
p.R222H
DO233935
GACA
ICGC
VRLGLPPVP
DEG_APCC_DBOX_1
0.1667
p.D240E
DO229045
LICA
ICGC
VRLGLPPVP
DEG_APCC_DBOX_1
0.2222
p.H220R
SIDM00884
Breast Carcinoma
GDSC
VRLGLPPVP
DEG_APCC_DBOX_1
0.1111
p.H220R
ACH-000699
Breast Cancer
CCLE
VRLGLPPVP
DEG_APCC_DBOX_1
0.1111
p.H220R
HCC1395
breast
COSMIC
VRLGLPPVP
DEG_APCC_DBOX_1
0.1111
p.V235A
ACH-001390
Breast Cancer
CCLE
VRLGLPPVP
DEG_APCC_DBOX_1
0.6936
Drug responses associated with TUBGCP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRLGLPPVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RT7
Gamma-tubulin complex component 6
DEG_APCC_DBOX_1
228:236
VRLGLPPVP
APC,CDC20,FZR1
0.962
More...