DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRLNLRGLL
Uniprot ID:
Q6P3X3
Source protein:
Tetratricopeptide repeat protein 27
Source gene:
TTC27
Class:
DEG_APCC_DBOX_1
Location:
791:799
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.547
ASA_SCORE:
39.2111
COIL:
0.0101
CONS_SCORE:
0.443
DSS_SCORE:
0.1516
HELIX:
0.9884
FCONS_SCORE:
1.3626
RIG_SCORE:
0.802
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S789Y
TCGA-AG-A002
READ
TCGA
VRLNLRGLL
DEG_APCC_DBOX_1
0.2778
p.L798M
TCGA-B5-A3FC
UCEC
TCGA
VRLNLRGLL
DEG_APCC_DBOX_1
0.5999
p.L798M
DO41871
UCEC
ICGC
VRLNLRGLL
DEG_APCC_DBOX_1
0.5999
p.S781F
TCGA-FR-A7U9
SKCM
TCGA
VRLNLRGLL
DEG_APCC_DBOX_1
0.0556
p.S781F
DO48546
SKCM
ICGC
VRLNLRGLL
DEG_APCC_DBOX_1
0.0556
p.N794S
DO51529
PACA
ICGC
VRLNLRGLL
DEG_APCC_DBOX_1
0.5958
p.N794S
SIDM00143
Small Cell Lung Carcinoma
GDSC
VRLNLRGLL
DEG_APCC_DBOX_1
0.5958
p.V791G
SIDM00217
Colorectal Carcinoma
GDSC
VRLNLRGLL
DEG_APCC_DBOX_1
0.6421
p.V791G
ACH-000999
Colon/Colorectal Cancer
CCLE
VRLNLRGLL
DEG_APCC_DBOX_1
0.6421
p.V791G
SNU-1040
large_intestine
COSMIC
VRLNLRGLL
DEG_APCC_DBOX_1
0.6421
p.V809M
ACH-001001
Bone Cancer
CCLE
VRLNLRGLL
DEG_APCC_DBOX_1
0.0556
Drug responses associated with TTC27 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRLNLRGLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P3X3
Tetratricopeptide repeat protein 27
DEG_APCC_DBOX_1
791:799
VRLNLRGLL
APC,CDC20,FZR1
0.547
More...