DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VRMYIE
Uniprot ID:
Q96T23
Source protein:
Remodeling and spacing factor 1
Source gene:
RSF1
Class:
LIG_APCC_ABBA_1
Location:
173:178
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7568
ASA_SCORE:
54.5667
COIL:
0.1483
CONS_SCORE:
0.4417
DSS_SCORE:
0.4101
HELIX:
0.0035
FCONS_SCORE:
0.9973
RIG_SCORE:
0.8373
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W188C
TCGA-19-5956
GBM
TCGA
VRMYIE
LIG_APCC_ABBA_1
0.0556
p.W188C
DO13863
GBM
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.0556
p.D184Y
TCGA-19-5956
GBM
TCGA
VRMYIE
LIG_APCC_ABBA_1
0.1667
p.D184Y
TCGA-D1-A16Y
UCEC
TCGA
VRMYIE
LIG_APCC_ABBA_1
0.1667
p.D184Y
DO13863
GBM
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.1667
p.D184Y
DO41524
UCEC
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.1667
p.Q168K
DO229045
LICA
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.1944
p.I179V
DO231762
LINC
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.3056
p.P180L
DO231204
LUSC
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.2778
p.S186F
DO220877
MELA
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.5556
p.T178A
DO220906
MELA
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.7139
p.D182G
DO228138
PBCA
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.2222
p.G186W
DO37445
SKCM
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.5556
p.E165K
DO38123
SKCM
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.1111
p.R164Q
DO52412
UCEC
ICGC
VRMYIE
LIG_APCC_ABBA_1
0.0833
p.R174K
SIDM00272
Breast Carcinoma
GDSC
VRMYIE
LIG_APCC_ABBA_1
0.6126
p.R174K
ACH-000910
Breast Cancer
CCLE
VRMYIE
LIG_APCC_ABBA_1
0.6126
p.R174K
MDA-MB-453
breast
COSMIC
VRMYIE
LIG_APCC_ABBA_1
0.6126
p.D182N
ACH-001607
Gallbladder Cancer
CCLE
VRMYIE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with RSF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRMYIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T23
Remodeling and spacing factor 1
LIG_APCC_ABBA_1
173:178
VRMYIE
APC,CDC20,FZR1
0.7568
More...