DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRNKLKSME
Uniprot ID:
Q13277
Source protein:
Syntaxin-3
Source gene:
STX3
Class:
DEG_APCC_DBOX_1
Location:
91:99
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9289
ASA_SCORE:
79.2556
COIL:
0.0258
CONS_SCORE:
0.4766
DSS_SCORE:
0.4767
HELIX:
0.9761
FCONS_SCORE:
1.5126
RIG_SCORE:
0.7161
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K100N
TCGA-23-1121
OV
TCGA
VRNKLKSME
DEG_APCC_DBOX_1
0.75
p.K100N
DO28731
OV
ICGC
VRNKLKSME
DEG_APCC_DBOX_1
0.75
p.K94T
TCGA-AA-3984
COAD
TCGA
VRNKLKSME
DEG_APCC_DBOX_1
0.6195
p.K94T
TCGA-AX-A0J0
UCEC
TCGA
VRNKLKSME
DEG_APCC_DBOX_1
0.6195
p.K94T
DO9002
COAD
ICGC
VRNKLKSME
DEG_APCC_DBOX_1
0.6195
p.K94T
DO41133
UCEC
ICGC
VRNKLKSME
DEG_APCC_DBOX_1
0.6195
p.R87M
TCGA-D3-A1Q3
SKCM
TCGA
VRNKLKSME
DEG_APCC_DBOX_1
0.2222
p.R87M
DO47509
SKCM
ICGC
VRNKLKSME
DEG_APCC_DBOX_1
0.2222
p.N90K
TCGA-F5-6813
READ
TCGA
VRNKLKSME
DEG_APCC_DBOX_1
0.3056
p.N90K
DO36400
READ
ICGC
VRNKLKSME
DEG_APCC_DBOX_1
0.3056
p.N90K
SIDM00779
Colorectal Carcinoma
GDSC
VRNKLKSME
DEG_APCC_DBOX_1
0.3056
p.N90K
NCI-H716
large_intestine
COSMIC
VRNKLKSME
DEG_APCC_DBOX_1
0.3056
p.T81M
SIDM00433
T-Lymphoblastic Leukemia
GDSC
VRNKLKSME
DEG_APCC_DBOX_1
0.0556
p.T81M
ACH-000795
Leukemia
CCLE
VRNKLKSME
DEG_APCC_DBOX_1
0.0556
p.T81M
MOLT-13
haematopoietic_and_lymphoid_tissue
COSMIC
VRNKLKSME
DEG_APCC_DBOX_1
0.0556
p.R92Q
SIDM01099
Neuroblastoma
GDSC
VRNKLKSME
DEG_APCC_DBOX_1
0.7329
p.R92Q
ACH-000341
Neuroblastoma
CCLE
VRNKLKSME
DEG_APCC_DBOX_1
0.7329
p.R92Q
SK-N-FI
autonomic_ganglia
COSMIC
VRNKLKSME
DEG_APCC_DBOX_1
0.7329
p.E106D
SIDM01677
Non-Small Cell Lung Carcinoma
GDSC
VRNKLKSME
DEG_APCC_DBOX_1
0.1389
p.N93K
ACH-000634
Brain Cancer
CCLE
VRNKLKSME
DEG_APCC_DBOX_1
0.5806
p.K86I
ACH-000820
Colon/Colorectal Cancer
CCLE
VRNKLKSME
DEG_APCC_DBOX_1
0.3056
p.V99M
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VRNKLKSME
DEG_APCC_DBOX_1
0.7208
Drug responses associated with STX3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRNKLKSME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13277
Syntaxin-3
DEG_APCC_DBOX_1
91:99
VRNKLKSME
APC,CDC20,FZR1
0.9289
More...