DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRNTPLTS
Uniprot ID:
Q9NQ75
Source protein:
Cas scaffolding protein family member 4
Source gene:
CASS4
Class:
DEG_SCF_FBW7_1
Location:
255:262
E3 ligase:
FBXW7
DEGRON score:
0.9987
ASA_SCORE:
81.0625
COIL:
0.8409
CONS_SCORE:
0.3085
DSS_SCORE:
0.5779
HELIX:
0.053
FCONS_SCORE:
0.7379
RIG_SCORE:
0.6992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A264V
TCGA-06-5416
GBM
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.A264V
TCGA-BR-8591
STAD
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.A264V
DO10880
GBM
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.A264V
DO47973
STAD
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.S254C
TCGA-13-0920
OV
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.3056
p.S254C
DO28099
OV
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.3056
p.A264G
TCGA-21-1083
LUSC
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.A264G
DO26769
LUSC
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.K252M
TCGA-39-5011
LUSC
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.3611
p.K252M
DO27532
LUSC
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.3611
p.A271S
TCGA-46-3769
LUSC
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271S
DO26590
LUSC
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271P
TCGA-53-A4EZ
LUAD
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271P
DO45319
LUAD
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271P
SIDM01078
Small Cell Lung Carcinoma
GDSC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271P
ACH-000790
Lung Cancer
CCLE
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271P
SHP-77
lung
COSMIC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.S249P
TCGA-AP-A1DV
UCEC
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.6111
p.S249P
DO43186
UCEC
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.6111
p.V255I
TCGA-BH-A0DL
BRCA
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.5965
p.V255I
DO2545
BRCA
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.5965
p.V255I
SIDM01435
Hepatocellular Carcinoma
GDSC
VRNTPLTS
DEG_SCF_FBW7_1
0.5965
p.V255I
ACH-000686
Liver Cancer
CCLE
VRNTPLTS
DEG_SCF_FBW7_1
0.5965
p.S262G
TCGA-D8-A1J8
BRCA
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.6993
p.S262G
DO1269
BRCA
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.6993
p.A271T
TCGA-HF-7132
STAD
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271T
DO48682
LIRI
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271T
DO38214
STAD
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271V
TCGA-LH-A9QB
SKCM
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.A271V
DO51266
SKCM
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.0833
p.E266G
TCGA-S8-A6BV
ESCA
TCGA
VRNTPLTS
DEG_SCF_FBW7_1
0.2222
p.A264S
DO228976
LICA
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.2778
p.E266K
DO222837
MELA
ICGC
VRNTPLTS
DEG_SCF_FBW7_1
0.2222
p.P259T
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
VRNTPLTS
DEG_SCF_FBW7_1
0.7031
p.P259T
ACH-000945
Lung Cancer
CCLE
VRNTPLTS
DEG_SCF_FBW7_1
0.7031
p.P259T
NCI-H650
lung
COSMIC
VRNTPLTS
DEG_SCF_FBW7_1
0.7031
Drug responses associated with CASS4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRNTPLTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ75
Cas scaffolding protein family member 4
DEG_SCF_FBW7_1
255:262
VRNTPLTS
FBXW7
0.9987
More...