DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRPDLGELS
Uniprot ID:
P51970
Source protein:
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
Source gene:
NDUFA8
Class:
DEG_APCC_DBOX_1
Location:
118:126
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8653
ASA_SCORE:
66.5333
COIL:
0.7776
CONS_SCORE:
0.4393
DSS_SCORE:
0.2715
HELIX:
0.0864
FCONS_SCORE:
0.9226
RIG_SCORE:
0.7685
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D108V
TCGA-77-7140
LUSC
TCGA
VRPDLGELS
DEG_APCC_DBOX_1
0.0556
p.D108V
DO26455
LUSC
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.0556
p.K130T
TCGA-AP-A1DV
UCEC
TCGA
VRPDLGELS
DEG_APCC_DBOX_1
0.3333
p.K130T
DO43186
UCEC
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.3333
p.S126A
TCGA-B5-A3FA
UCEC
TCGA
VRPDLGELS
DEG_APCC_DBOX_1
0.6477
p.S126A
DO52402
UCEC
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.6477
p.R119W
TCGA-D3-A8GL
SKCM
TCGA
VRPDLGELS
DEG_APCC_DBOX_1
0.8634
p.R119W
DO50287
SKCM
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.8634
p.P136T
DO229037
LICA
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.0556
p.P136T
DO229045
LICA
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.0556
p.D121G
DO229268
THCA
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.6087
p.D121E
DO229221
THCA
ICGC
VRPDLGELS
DEG_APCC_DBOX_1
0.5647
p.E109K
SIDM01016
T-Lymphoblastic Leukemia
GDSC
VRPDLGELS
DEG_APCC_DBOX_1
0.0833
p.E109K
ACH-000995
Leukemia
CCLE
VRPDLGELS
DEG_APCC_DBOX_1
0.0833
p.E109K
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VRPDLGELS
DEG_APCC_DBOX_1
0.0833
p.R135Q
SIDM01689
B-Lymphoblastic Leukemia
GDSC
VRPDLGELS
DEG_APCC_DBOX_1
0.0833
Drug responses associated with NDUFA8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRPDLGELS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51970
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
DEG_APCC_DBOX_1
118:126
VRPDLGELS
APC,CDC20,FZR1
0.8653
More...