DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRPHTE
Uniprot ID:
O94888
Source protein:
UBX domain-containing protein 7
Source gene:
UBXN7
Class:
LIG_APCC_ABBA_1
Location:
69:74
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.927
ASA_SCORE:
101.5667
COIL:
0.8798
CONS_SCORE:
0.3145
DSS_SCORE:
0.6127
HELIX:
0.1127
FCONS_SCORE:
0.7422
RIG_SCORE:
0.6786
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R78C
TCGA-55-8506
LUAD
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.2222
p.R78C
TCGA-AP-A1E0
UCEC
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.2222
p.E76D
TCGA-CD-A48A
STAD
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.2778
p.E76D
DO47781
STAD
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.2778
p.R78H
TCGA-CN-5360
HNSC
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.2222
p.R78H
DO14662
HNSC
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.2222
p.T73I
TCGA-EY-A1GU
UCEC
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.5966
p.T73I
DO41518
UCEC
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.5966
p.T73I
SIDM00217
Colorectal Carcinoma
GDSC
VRPHTE
LIG_APCC_ABBA_1
0.5966
p.T73I
ACH-000999
Colon/Colorectal Cancer
CCLE
VRPHTE
LIG_APCC_ABBA_1
0.5966
p.T73I
SNU-1040
large_intestine
COSMIC
VRPHTE
LIG_APCC_ABBA_1
0.5966
p.V69A
TCGA-FI-A2D5
UCEC
TCGA
VRPHTE
LIG_APCC_ABBA_1
0.6936
p.V69A
DO41331
UCEC
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.6936
p.R67T
DO44121
BRCA
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.2778
p.P82T
DO222908
MELA
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.1111
p.A64P
DO32819
PACA
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.1944
p.A64P
SIDM01136
Pancreatic Carcinoma
GDSC
VRPHTE
LIG_APCC_ABBA_1
0.1944
p.A64P
ACH-000417
Pancreatic Cancer
CCLE
VRPHTE
LIG_APCC_ABBA_1
0.1944
p.A64P
PANC-08-13
pancreas
COSMIC
VRPHTE
LIG_APCC_ABBA_1
0.1944
p.I68M
DO42977
UCEC
ICGC
VRPHTE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with UBXN7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRPHTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94888
UBX domain-containing protein 7
LIG_APCC_ABBA_1
69:74
VRPHTE
APC,CDC20,FZR1
0.927
More...