DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRPKLKTVP
Uniprot ID:
Q9NRL2
Source protein:
Bromodomain adjacent to zinc finger domain protein 1A
Source gene:
BAZ1A
Class:
DEG_APCC_DBOX_1
Location:
1178:1186
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5947
ASA_SCORE:
69.2
COIL:
0.9147
CONS_SCORE:
0.4055
DSS_SCORE:
0.1111
HELIX:
0.0214
FCONS_SCORE:
0.9729
RIG_SCORE:
0.7747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1182F
TCGA-AG-A002
READ
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.6981
p.R1179Q
TCGA-DU-6392
LGG
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.7329
p.R1179Q
DO22237
LGG
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.7329
p.H1174Y
TCGA-EE-A29M
SKCM
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.2222
p.H1174Y
DO37404
SKCM
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.2222
p.R1171S
TCGA-EE-A2GE
SKCM
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.R1171S
DO38016
SKCM
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1186T
DO229022
LICA
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.5919
p.R1196Q
SIDM02048
Colorectal Carcinoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.0556
p.T1184A
SIDM00337
Melanoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.6028
p.T1184A
MEL-HO
skin
COSMIC
VRPKLKTVP
DEG_APCC_DBOX_1
0.6028
p.P1193S
SIDM00901
Endometrial Carcinoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1193S
ACH-000940
Endometrial/Uterine Cancer
CCLE
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1193S
AN3-CA
endometrium
COSMIC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
Drug responses associated with BAZ1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRPKLKTVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NRL2
Bromodomain adjacent to zinc finger domain protein 1A
DEG_APCC_DBOX_1
1178:1186
VRPKLKTVP
APC,CDC20,FZR1
0.5947
More...