DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRPKLKTVP
Uniprot ID:
Q9NRL2
Source protein:
Bromodomain adjacent to zinc finger domain protein 1A
Source gene:
BAZ1A
Class:
DEG_APCC_DBOX_1
Location:
1178:1186
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5947
ASA_SCORE:
69.2
COIL:
0.9147
CONS_SCORE:
0.4055
DSS_SCORE:
0.1111
HELIX:
0.0214
FCONS_SCORE:
0.9729
RIG_SCORE:
0.7747
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1179Q
TCGA-DU-6392
LGG
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.7329
p.R1179Q
DO22237
LGG
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.7329
p.L1182F
TCGA-AG-A002
READ
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.6981
p.T1184A
SIDM00337
Melanoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.6028
p.T1184A
MEL-HO
skin
COSMIC
VRPKLKTVP
DEG_APCC_DBOX_1
0.6028
p.P1186T
DO229022
LICA
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.5919
p.H1174Y
TCGA-EE-A29M
SKCM
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.2222
p.H1174Y
DO37404
SKCM
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.2222
p.R1171S
TCGA-EE-A2GE
SKCM
TCGA
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.R1171S
DO38016
SKCM
ICGC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1193S
SIDM00901
Endometrial Carcinoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1193S
ACH-000940
Endometrial/Uterine Cancer
CCLE
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.P1193S
AN3-CA
endometrium
COSMIC
VRPKLKTVP
DEG_APCC_DBOX_1
0.1389
p.R1196Q
SIDM02048
Colorectal Carcinoma
GDSC
VRPKLKTVP
DEG_APCC_DBOX_1
0.0556
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Drug responses associated with BAZ1A mutations
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Cancer
Mutation (In Degron?)
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Drug
IC50
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All proteins holding degron of VRPKLKTVP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NRL2
Bromodomain adjacent to zinc finger domain protein 1A
DEG_APCC_DBOX_1
1178:1186
VRPKLKTVP
APC,CDC20,FZR1
0.5947
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