DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VRPNLPQLL
Uniprot ID:
Q9UKI8
Source protein:
Serine/threonine-protein kinase tousled-like 1
Source gene:
TLK1
Class:
DEG_APCC_DBOX_1
Location:
383:391
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6163
ASA_SCORE:
83.7222
COIL:
0.7726
CONS_SCORE:
0.4323
DSS_SCORE:
0.4455
HELIX:
0.1456
FCONS_SCORE:
0.9138
RIG_SCORE:
0.7747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R384I
TCGA-21-1083
LUSC
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.8102
p.R384I
DO26769
LUSC
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.8102
p.H397D
TCGA-AX-A2IO
UCEC
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.1667
p.H397D
DO40800
UCEC
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.1667
p.E400G
TCGA-B5-A3FA
UCEC
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.Q399H
TCGA-CR-7379
HNSC
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.1111
p.E400K
TCGA-EE-A2GC
SKCM
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.E400K
DO37839
SKCM
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.E400K
SIDM01068
Non-Small Cell Lung Carcinoma
GDSC
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.E400K
ACH-000562
Lung Cancer
CCLE
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.E400K
HCC-78
lung
COSMIC
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
p.E378Q
TCGA-GN-A8LK
SKCM
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.1944
p.E378Q
DO51259
SKCM
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.1944
p.L390V
TCGA-YL-A8SO
PRAD
TCGA
VRPNLPQLL
DEG_APCC_DBOX_1
0.5654
p.S382C
DO51884
BLCA
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.3056
p.Q389K
DO229015
LICA
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.5833
p.A373E
DO229036
LICA
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.0556
p.A373G
DO229058
LICA
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.0556
p.P387L
DO47795
STAD
ICGC
VRPNLPQLL
DEG_APCC_DBOX_1
0.7582
p.P388L
SIDM00364
B-Lymphoblastic Leukemia
GDSC
VRPNLPQLL
DEG_APCC_DBOX_1
0.6471
p.P388L
ACH-002059
Leukemia
CCLE
VRPNLPQLL
DEG_APCC_DBOX_1
0.6471
p.P388L
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VRPNLPQLL
DEG_APCC_DBOX_1
0.6471
p.G376E
SIDM01779
Gastric Carcinoma
GDSC
VRPNLPQLL
DEG_APCC_DBOX_1
0.1389
p.G376E
ACH-000761
Gastric Cancer
CCLE
VRPNLPQLL
DEG_APCC_DBOX_1
0.1389
p.V374I
ACH-001346
Head and Neck Cancer
CCLE
VRPNLPQLL
DEG_APCC_DBOX_1
0.0833
Drug responses associated with TLK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRPNLPQLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_APCC_DBOX_1
383:391
VRPNLPQLL
APC,CDC20,FZR1
0.6163
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