DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRQHLSRLP
Uniprot ID:
Q9BZE4
Source protein:
GTP-binding protein 4
Source gene:
GTPBP4
Class:
DEG_APCC_DBOX_1
Location:
154:162
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7482
ASA_SCORE:
68.5889
COIL:
0.4567
CONS_SCORE:
0.546
DSS_SCORE:
0.268
HELIX:
0.5218
FCONS_SCORE:
1.2131
RIG_SCORE:
0.7941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E152G
TCGA-2W-A8YY
CESC
TCGA
VRQHLSRLP
DEG_APCC_DBOX_1
0.2778
p.T168I
TCGA-60-2715
LUSC
TCGA
VRQHLSRLP
DEG_APCC_DBOX_1
0.6111
p.R155C
TCGA-BR-4184
STAD
TCGA
VRQHLSRLP
DEG_APCC_DBOX_1
0.8301
p.R155C
SIDM01307
Colorectal Carcinoma
GDSC
VRQHLSRLP
DEG_APCC_DBOX_1
0.8301
p.S159F
TCGA-EE-A3AA
SKCM
TCGA
VRQHLSRLP
DEG_APCC_DBOX_1
0.6871
p.E149K
TCGA-FI-A2D0
UCEC
TCGA
VRQHLSRLP
DEG_APCC_DBOX_1
0.1944
p.G146V
DO229015
LICA
ICGC
VRQHLSRLP
DEG_APCC_DBOX_1
0.1111
p.V154M
SIDM00516
Melanoma
GDSC
VRQHLSRLP
DEG_APCC_DBOX_1
0.6097
p.V154M
MZ7-mel
skin
COSMIC
VRQHLSRLP
DEG_APCC_DBOX_1
0.6097
Drug responses associated with GTPBP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRQHLSRLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BZE4
GTP-binding protein 4
DEG_APCC_DBOX_1
154:162
VRQHLSRLP
APC,CDC20,FZR1
0.7482
More...