DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRQSLKNVY
Uniprot ID:
Q8NEL0
Source protein:
Coiled-coil domain-containing protein 54
Source gene:
CCDC54
Class:
DEG_APCC_DBOX_1
Location:
24:32
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8122
ASA_SCORE:
84.9889
COIL:
0.3628
CONS_SCORE:
0.6636
DSS_SCORE:
0.326
HELIX:
0.6049
FCONS_SCORE:
1.1294
RIG_SCORE:
0.7856
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S27Y
TCGA-44-2657
LUAD
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.6009
p.S27Y
DO25020
LUAD
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.6009
p.M16K
TCGA-44-5644
LUAD
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.1111
p.M16K
DO25153
LUAD
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1111
p.R14W
TCGA-55-7727
LUAD
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.0556
p.R14W
DO24297
LUAD
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.0556
p.M16I
TCGA-63-A5MS
LUSC
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.1111
p.M16I
DO219161
LUSC
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1111
p.Q26H
TCGA-A8-A09B
BRCA
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.647
p.Q26H
DO1653
BRCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.647
p.R38W
TCGA-EE-A2MR
SKCM
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38W
TCGA-EO-A22X
UCEC
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38W
DO37819
SKCM
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38W
DO43907
UCEC
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.S19L
TCGA-K4-A54R
BLCA
TCGA
VRQSLKNVY
DEG_APCC_DBOX_1
0.1944
p.S19L
DO48611
BLCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1944
p.R38Q
DO229010
COCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38Q
DO229013
COCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38Q
DO229016
COCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38Q
DO229003
COCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.R38Q
DO229005
COCA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.1667
p.H33Q
DO228205
LICA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.3056
p.Q15H
DO220889
MELA
ICGC
VRQSLKNVY
DEG_APCC_DBOX_1
0.0833
p.S27P
SIDM00507
Other Solid Cancers
GDSC
VRQSLKNVY
DEG_APCC_DBOX_1
0.5641
p.S27P
ACH-001490
Lung Cancer
CCLE
VRQSLKNVY
DEG_APCC_DBOX_1
0.5641
p.S27P
COR-L321
NS
COSMIC
VRQSLKNVY
DEG_APCC_DBOX_1
0.5641
p.V31A
ACH-001061
Colon/Colorectal Cancer
CCLE
VRQSLKNVY
DEG_APCC_DBOX_1
0.6936
Drug responses associated with CCDC54 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRQSLKNVY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEL0
Coiled-coil domain-containing protein 54
DEG_APCC_DBOX_1
24:32
VRQSLKNVY
APC,CDC20,FZR1
0.8122
More...