DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSKLKAIE
Uniprot ID:
P61266
Source protein:
Syntaxin-1B
Source gene:
STX1B
Class:
DEG_APCC_DBOX_1
Location:
88:96
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8049
ASA_SCORE:
75.2556
COIL:
0.0202
CONS_SCORE:
0.4807
DSS_SCORE:
0.3856
HELIX:
0.981
FCONS_SCORE:
1.5278
RIG_SCORE:
0.7784
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R89W
TCGA-06-5416
GBM
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.8634
p.R89W
DO10880
GBM
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.8634
p.I81S
TCGA-98-8023
LUSC
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.1389
p.I81S
DO26668
LUSC
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.1389
p.D80G
TCGA-B5-A3FC
UCEC
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.1111
p.D80G
DO41871
UCEC
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.1111
p.N86T
TCGA-CG-5721
STAD
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.2778
p.N86T
DO38192
STAD
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.2778
p.G104W
TCGA-CV-6933
HNSC
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.1111
p.G104W
DO14164
HNSC
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.1111
p.S90F
TCGA-EB-A41B
SKCM
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.6871
p.S90F
DO37611
SKCM
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.6871
p.S90C
TCGA-EM-A2OZ
THCA
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.643
p.S90C
DO39708
THCA
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.643
p.N86S
TCGA-FI-A2D5
UCEC
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.2778
p.N86S
DO41331
UCEC
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.2778
p.N106K
TCGA-FU-A3HY
CESC
TCGA
VRSKLKAIE
DEG_APCC_DBOX_1
0.0556
p.N106K
DO6284
CESC
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.0556
p.A94E
DO228986
LICA
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.659
p.Q101K
DO229032
LICA
ICGC
VRSKLKAIE
DEG_APCC_DBOX_1
0.1944
p.Q97R
SIDM00817
Kidney Carcinoma
GDSC
VRSKLKAIE
DEG_APCC_DBOX_1
0.3056
p.Q97R
ACH-002191
Kidney Cancer
CCLE
VRSKLKAIE
DEG_APCC_DBOX_1
0.3056
p.Q97R
RCC-JW
kidney
COSMIC
VRSKLKAIE
DEG_APCC_DBOX_1
0.3056
Drug responses associated with STX1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSKLKAIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P61266
Syntaxin-1B
DEG_APCC_DBOX_1
88:96
VRSKLKAIE
APC,CDC20,FZR1
0.8049
More...