DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSKLKSIE
Uniprot ID:
Q16623
Source protein:
Syntaxin-1A
Source gene:
STX1A
Class:
DEG_APCC_DBOX_1
Location:
89:97
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6482
ASA_SCORE:
62.8333
COIL:
0.0236
CONS_SCORE:
0.469
DSS_SCORE:
0.4207
HELIX:
0.9777
FCONS_SCORE:
1.3537
RIG_SCORE:
0.7414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D81N
TCGA-E6-A1LX
UCEC
TCGA
VRSKLKSIE
DEG_APCC_DBOX_1
0.1111
p.D81N
DO41020
UCEC
ICGC
VRSKLKSIE
DEG_APCC_DBOX_1
0.1111
p.M79K
DO224664
COCA
ICGC
VRSKLKSIE
DEG_APCC_DBOX_1
0.0556
p.S99F
DO233867
GACA
ICGC
VRSKLKSIE
DEG_APCC_DBOX_1
0.7222
p.S95R
DO229029
LICA
ICGC
VRSKLKSIE
DEG_APCC_DBOX_1
0.6316
p.E101D
DO50940
LICA
ICGC
VRSKLKSIE
DEG_APCC_DBOX_1
0.2222
p.E103D
SIDM00217
Colorectal Carcinoma
GDSC
VRSKLKSIE
DEG_APCC_DBOX_1
0.1667
p.E103D
ACH-000999
Colon/Colorectal Cancer
CCLE
VRSKLKSIE
DEG_APCC_DBOX_1
0.1667
p.E103D
SNU-1040
large_intestine
COSMIC
VRSKLKSIE
DEG_APCC_DBOX_1
0.1667
Drug responses associated with STX1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSKLKSIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16623
Syntaxin-1A
DEG_APCC_DBOX_1
89:97
VRSKLKSIE
APC,CDC20,FZR1
0.6482
More...