DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSPLVPLP
Uniprot ID:
P43155
Source protein:
Carnitine O-acetyltransferase
Source gene:
CRAT
Class:
DEG_APCC_DBOX_1
Location:
368:376
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.703
ASA_SCORE:
92.9111
COIL:
0.956
CONS_SCORE:
0.3823
DSS_SCORE:
0.2719
HELIX:
0.0204
FCONS_SCORE:
0.8404
RIG_SCORE:
0.7959
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R369W
TCGA-AD-6965
COAD
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
DO228246
BRCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
DO9018
COAD
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
SIDM01090
Colorectal Carcinoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
ACH-000943
Colon/Colorectal Cancer
CCLE
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
RKO
large_intestine
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369Q
TCGA-L5-A8NE
ESCA
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.7329
p.L372M
DO229010
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229013
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229016
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229003
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229005
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.K380N
TCGA-CI-6621
READ
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.6667
p.K380N
DO36970
READ
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6667
p.P376L
SIDM00683
Prostate Carcinoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.P376L
ACH-000977
lymph_node
CCLE
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.P376L
LNCaP-Clone-FGC
prostate
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.P365S
DO50970
LICA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.25
p.R382W
TCGA-AX-A1CE
UCEC
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.R382W
DO42280
UCEC
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.T362S
SIDM00329
Hodgkin's Lymphoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.T362S
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.E360G
DO229056
LICA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1111
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Drug responses associated with CRAT mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VRSPLVPLP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43155
Carnitine O-acetyltransferase
DEG_APCC_DBOX_1
368:376
VRSPLVPLP
APC,CDC20,FZR1
0.703
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