DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSPLVPLP
Uniprot ID:
P43155
Source protein:
Carnitine O-acetyltransferase
Source gene:
CRAT
Class:
DEG_APCC_DBOX_1
Location:
368:376
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.703
ASA_SCORE:
92.9111
COIL:
0.956
CONS_SCORE:
0.3823
DSS_SCORE:
0.2719
HELIX:
0.0204
FCONS_SCORE:
0.8404
RIG_SCORE:
0.7959
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R369W
TCGA-AD-6965
COAD
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
DO228246
BRCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
DO9018
COAD
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
SIDM01090
Colorectal Carcinoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
ACH-000943
Colon/Colorectal Cancer
CCLE
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R369W
RKO
large_intestine
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.8634
p.R382W
TCGA-AX-A1CE
UCEC
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.R382W
DO42280
UCEC
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.K380N
TCGA-CI-6621
READ
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.6667
p.K380N
DO36970
READ
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6667
p.R369Q
TCGA-L5-A8NE
ESCA
TCGA
VRSPLVPLP
DEG_APCC_DBOX_1
0.7329
p.L372M
DO229010
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229013
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229016
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229003
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.L372M
DO229005
COCA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.711
p.E360G
DO229056
LICA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1111
p.P365S
DO50970
LICA
ICGC
VRSPLVPLP
DEG_APCC_DBOX_1
0.25
p.P376L
SIDM00683
Prostate Carcinoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.P376L
ACH-000977
lymph_node
CCLE
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.P376L
LNCaP-Clone-FGC
prostate
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.6471
p.T362S
SIDM00329
Hodgkin's Lymphoma
GDSC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
p.T362S
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
VRSPLVPLP
DEG_APCC_DBOX_1
0.1667
Drug responses associated with CRAT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSPLVPLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43155
Carnitine O-acetyltransferase
DEG_APCC_DBOX_1
368:376
VRSPLVPLP
APC,CDC20,FZR1
0.703
More...