DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSTLKKVF
Uniprot ID:
O94762
Source protein:
ATP-dependent DNA helicase Q5
Source gene:
RECQL5
Class:
DEG_APCC_DBOX_1
Location:
16:24
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9447
ASA_SCORE:
50.0444
COIL:
0.0674
CONS_SCORE:
0.5429
DSS_SCORE:
0.2729
HELIX:
0.931
FCONS_SCORE:
1.1801
RIG_SCORE:
0.8017
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R17Q
TCGA-BG-A221
UCEC
TCGA
VRSTLKKVF
DEG_APCC_DBOX_1
0.7329
p.R17Q
DO233747
GACA
ICGC
VRSTLKKVF
DEG_APCC_DBOX_1
0.7329
p.R17Q
DO42384
UCEC
ICGC
VRSTLKKVF
DEG_APCC_DBOX_1
0.7329
p.P12L
TCGA-R6-A6L6
ESCA
TCGA
VRSTLKKVF
DEG_APCC_DBOX_1
0.2222
p.R14W
TCGA-WS-AB45
COAD
TCGA
VRSTLKKVF
DEG_APCC_DBOX_1
0.2778
p.R14W
DO51734
COAD
ICGC
VRSTLKKVF
DEG_APCC_DBOX_1
0.2778
p.D11E
DO228986
LICA
ICGC
VRSTLKKVF
DEG_APCC_DBOX_1
0.1944
Drug responses associated with RECQL5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTLKKVF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94762
ATP-dependent DNA helicase Q5
DEG_APCC_DBOX_1
16:24
VRSTLKKVF
APC,CDC20,FZR1
0.9447
More...