DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTPGLS
Uniprot ID:
Q99456
Source protein:
Keratin, type I cytoskeletal 12
Source gene:
KRT12
Class:
DEG_SCF_FBW7_1
Location:
12:18
E3 ligase:
FBXW7
DEGRON score:
0.99
ASA_SCORE:
87.4571
COIL:
0.775
CONS_SCORE:
0.3395
DSS_SCORE:
0.53
HELIX:
0.0216
FCONS_SCORE:
1.4017
RIG_SCORE:
0.7148
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S18F
TCGA-14-0812
GBM
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.7982
p.S18F
DO12256
GBM
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.7982
p.S23W
TCGA-24-1565
OV
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.1944
p.S23W
DO31719
OV
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.1944
p.I27T
TCGA-99-7458
LUAD
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.0833
p.I27T
DO25416
LUAD
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.0833
p.S18T
TCGA-CV-7568
HNSC
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.6005
p.S18T
DO14160
HNSC
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6005
p.G28C
TCGA-DF-A2KU
UCEC
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.0556
p.G28C
DO223286
UCEC
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.0556
p.S9L
TCGA-ER-A19M
SKCM
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.25
p.S9L
DO37798
SKCM
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.25
p.R13H
TCGA-EY-A549
UCEC
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.7133
p.R13H
TCGA-G4-6298
COAD
TCGA
VRTPGLS
DEG_SCF_FBW7_1
0.7133
p.R13H
DO7834
COAD
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.7133
p.R13H
DO48174
UCEC
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.7133
p.P15S
DO228483
BRCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6752
p.P15S
DO229013
COCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6752
p.P15S
DO229016
COCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6752
p.P15S
DO229005
COCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6752
p.P15S
DO230990
LUSC
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.6752
p.R20W
DO227999
COCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.2778
p.R20W
DO229010
COCA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.2778
p.G28R
DO47004
RECA
ICGC
VRTPGLS
DEG_SCF_FBW7_1
0.0556
p.R13C
SIDM00980
Gastric Carcinoma
GDSC
VRTPGLS
DEG_SCF_FBW7_1
0.719
p.R13C
ACH-000948
Gastric Cancer
CCLE
VRTPGLS
DEG_SCF_FBW7_1
0.719
p.R13C
23132-87
stomach
COSMIC
VRTPGLS
DEG_SCF_FBW7_1
0.719
Drug responses associated with KRT12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTPGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99456
Keratin, type I cytoskeletal 12
DEG_SCF_FBW7_1
12:18
VRTPGLS
FBXW7
0.99
More...