DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTPLSQVN
Uniprot ID:
O14578
Source protein:
Citron Rho-interacting kinase
Source gene:
CIT
Class:
DEG_APCC_DBOX_1
Location:
2011:2019
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9582
ASA_SCORE:
77.0111
COIL:
0.6691
CONS_SCORE:
0.1671
DSS_SCORE:
0.4689
HELIX:
0.1769
FCONS_SCORE:
0.8452
RIG_SCORE:
0.7358
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2002L
TCGA-56-7823
LUSC
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.5278
p.R2009L
TCGA-78-7149
LUAD
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.2778
p.R2016H
TCGA-86-8055
LUAD
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.8244
p.R2016C
TCGA-AJ-A3BH
UCEC
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.8301
p.R2016C
ACH-000961
Endometrial/Uterine Cancer
CCLE
VRTPLSQVN
DEG_APCC_DBOX_1
0.8301
p.L2008V
TCGA-CG-4437
STAD
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.25
p.R2009C
TCGA-EO-A22U
UCEC
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.2778
p.R2009C
ACH-000971
Colon/Colorectal Cancer
CCLE
VRTPLSQVN
DEG_APCC_DBOX_1
0.2778
p.R2002H
TCGA-EY-A549
UCEC
TCGA
VRTPLSQVN
DEG_APCC_DBOX_1
0.5278
p.A2008T
DO227987
COCA
ICGC
VRTPLSQVN
DEG_APCC_DBOX_1
0.25
p.A2010V
DO11429
GBM
ICGC
VRTPLSQVN
DEG_APCC_DBOX_1
0.3056
p.A2010V
AN3-CA
endometrium
COSMIC
VRTPLSQVN
DEG_APCC_DBOX_1
0.3056
p.Q2017R
DO229272
THCA
ICGC
VRTPLSQVN
DEG_APCC_DBOX_1
0.6218
p.P2024L
SIDM00080
Melanoma
GDSC
VRTPLSQVN
DEG_APCC_DBOX_1
0.1944
p.P2024L
SK-MEL-5
skin
COSMIC
VRTPLSQVN
DEG_APCC_DBOX_1
0.1944
p.P2024S
SIDM00080
Melanoma
GDSC
VRTPLSQVN
DEG_APCC_DBOX_1
0.1944
p.P2024S
ACH-000730
Skin Cancer
CCLE
VRTPLSQVN
DEG_APCC_DBOX_1
0.1944
p.P2024S
SK-MEL-5
skin
COSMIC
VRTPLSQVN
DEG_APCC_DBOX_1
0.1944
p.R2010S
ACH-000817
Myeloma
CCLE
VRTPLSQVN
DEG_APCC_DBOX_1
0.3056
p.R2010S
RPMI-8226
haematopoietic_and_lymphoid_tissue
COSMIC
VRTPLSQVN
DEG_APCC_DBOX_1
0.3056
p.V2011M
CAL-33
upper_aerodigestive_tract
COSMIC
VRTPLSQVN
DEG_APCC_DBOX_1
0.6097
Drug responses associated with CIT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTPLSQVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14578
Citron Rho-interacting kinase
DEG_APCC_DBOX_1
2011:2019
VRTPLSQVN
APC,CDC20,FZR1
0.9582
More...