DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTPPRT
Uniprot ID:
Q6VAB6
Source protein:
Kinase suppressor of Ras 2
Source gene:
KSR2
Class:
DEG_SCF_FBW7_1
Location:
258:264
E3 ligase:
FBXW7
DEGRON score:
0.9959
ASA_SCORE:
113.6714
COIL:
0.9774
CONS_SCORE:
0.3488
DSS_SCORE:
0.7931
HELIX:
0.0097
FCONS_SCORE:
0.9943
RIG_SCORE:
0.5771
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R263H
TCGA-A6-4107
COAD
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.R263H
TCGA-BR-4184
STAD
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.R263H
TCGA-FI-A2D5
UCEC
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.R263H
ACH-000990
Endometrial/Uterine Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.R263C
TCGA-AA-A01R
COAD
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R263C
TCGA-B5-A5OC
UCEC
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R263C
DO7934
COAD
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R263C
DO52405
UCEC
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R263C
ACH-000007
Colon/Colorectal Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R263C
LS-513
large_intestine
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.719
p.R253Q
TCGA-AJ-A2QO
UCEC
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.1944
p.R253Q
TCGA-HT-8563
LGG
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.1944
p.T270I
TCGA-BF-A1PX
SKCM
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.6111
p.T270I
DO51236
SKCM
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.6111
p.A257V
TCGA-BR-7851
STAD
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.3056
p.P261L
TCGA-DU-5870
LGG
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.7582
p.P261S
TCGA-EE-A29G
SKCM
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.6752
p.S251L
TCGA-W3-A828
SKCM
TCGA
VRTPPRT
DEG_SCF_FBW7_1
0.1389
p.P258L
DO234269
ESAD
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.7582
p.R259H
DO233864
GACA
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.R259H
DO228142
PBCA
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.7133
p.P265S
DO220907
MELA
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.3056
p.G260E
DO37519
SKCM
ICGC
VRTPPRT
DEG_SCF_FBW7_1
0.7199
p.P263L
SIDM01943
Colorectal Carcinoma
GDSC
VRTPPRT
DEG_SCF_FBW7_1
0.7582
p.P248S
SIDM00660
Colorectal Carcinoma
GDSC
VRTPPRT
DEG_SCF_FBW7_1
0.0556
p.P248S
LS-411N
large_intestine
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.0556
p.P264L
SIDM00150
Colorectal Carcinoma
GDSC
VRTPPRT
DEG_SCF_FBW7_1
0.7582
p.P264L
KM12
large_intestine
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.7582
p.V268L
ACH-000250
Kidney Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.2222
p.V268L
KMRC-20
kidney
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.2222
p.R255W
ACH-000383
Esophageal Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.25
p.R255W
ACH-000694
Esophageal Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.25
p.R255W
OE33
oesophagus
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.25
p.P262L
ACH-000915
Skin Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.6471
p.P262L
IPC-298
skin
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.6471
p.I267L
ACH-000987
Skin Cancer
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.25
p.I267L
Mewo
skin
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.25
p.P250T
ACH-002272
Lymphoma
CCLE
VRTPPRT
DEG_SCF_FBW7_1
0.1111
p.P250T
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
VRTPPRT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with KSR2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTPPRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6VAB6
Kinase suppressor of Ras 2
DEG_SCF_FBW7_1
258:264
VRTPPRT
FBXW7
0.9959
More...