DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTPTNT
Uniprot ID:
Q9H694
Source protein:
Protein bicaudal C homolog 1
Source gene:
BICC1
Class:
DEG_SCF_FBW7_1
Location:
751:757
E3 ligase:
FBXW7
DEGRON score:
0.98
ASA_SCORE:
63.7143
COIL:
0.7671
CONS_SCORE:
0.5645
DSS_SCORE:
0.3423
HELIX:
0.0497
FCONS_SCORE:
0.9506
RIG_SCORE:
0.7717
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L743V
TCGA-2H-A9GR
ESCA
TCGA
VRTPTNT
DEG_SCF_FBW7_1
0.1111
p.E750A
TCGA-CG-5720
STAD
TCGA
VRTPTNT
DEG_SCF_FBW7_1
0.3056
p.T749M
TCGA-D1-A15X
UCEC
TCGA
VRTPTNT
DEG_SCF_FBW7_1
0.2778
p.T749M
TCGA-VS-A9UD
CESC
TCGA
VRTPTNT
DEG_SCF_FBW7_1
0.2778
p.T749K
SIDM00347
Esophageal Squamous Cell Carcinoma
GDSC
VRTPTNT
DEG_SCF_FBW7_1
0.2778
p.T749K
ACH-000408
Esophageal Cancer
CCLE
VRTPTNT
DEG_SCF_FBW7_1
0.2778
p.T749K
TE-5
oesophagus
COSMIC
VRTPTNT
DEG_SCF_FBW7_1
0.2778
p.V751D
SIDM00537
Colorectal Carcinoma
GDSC
VRTPTNT
DEG_SCF_FBW7_1
0.7785
p.V751D
ACH-000982
Colon/Colorectal Cancer
CCLE
VRTPTNT
DEG_SCF_FBW7_1
0.7785
p.V751D
ACH-001345
Colon/Colorectal Cancer
CCLE
VRTPTNT
DEG_SCF_FBW7_1
0.7785
p.V751D
GP5d
large_intestine
COSMIC
VRTPTNT
DEG_SCF_FBW7_1
0.7785
Drug responses associated with BICC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTPTNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H694
Protein bicaudal C homolog 1
DEG_SCF_FBW7_1
751:757
VRTPTNT
FBXW7
0.98
More...