DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VRVDLEDVN
Uniprot ID:
Q6V1P9
Source protein:
Protocadherin-23
Source gene:
DCHS2
Class:
DEG_APCC_DBOX_1
Location:
757:765
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6025
ASA_SCORE:
44.2
COIL:
0.2218
CONS_SCORE:
0.1529
DSS_SCORE:
0.3743
HELIX:
0.0058
FCONS_SCORE:
0.9382
RIG_SCORE:
0.8181
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G764V
TCGA-BF-A1PZ
SKCM
TCGA
VRVDLEDVN
DEG_APCC_DBOX_1
0.7532
p.G764V
DO50279
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.7532
p.L774H
TCGA-CG-4469
STAD
TCGA
VRVDLEDVN
DEG_APCC_DBOX_1
0.0833
p.L774H
DO38507
STAD
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0833
p.D757A
TCGA-DM-A1HB
COAD
TCGA
VRVDLEDVN
DEG_APCC_DBOX_1
0.7793
p.G758C
TCGA-EE-A29Q
SKCM
TCGA
VRVDLEDVN
DEG_APCC_DBOX_1
0.76
p.G758C
DO37866
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.76
p.W755L
TCGA-EE-A2GK
SKCM
TCGA
VRVDLEDVN
DEG_APCC_DBOX_1
0.2778
p.W755L
DO37738
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.2778
p.V764M
DO230347
COCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.6097
p.V764M
DO234185
ESAD
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.6097
p.H768R
DO229010
COCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.H768R
DO229003
COCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.H768R
DO230659
LAML
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.H768R
DO231140
LAML
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.H768R
DO230556
LUSC
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.G758D
DO234204
ESAD
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.7198
p.L774P
DO234269
ESAD
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0833
p.Y751N
DO228313
LICA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1667
p.A761S
DO228844
LICA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.7588
p.H768N
DO229019
LICA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.N772K
DO229015
LICA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1389
p.T775N
DO229036
LICA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0556
p.G749D
DO220862
MELA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1111
p.R758C
DO220912
MELA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.8301
p.G764R
DO222775
MELA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.7568
p.E762D
DO37595
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.5647
p.D747N
DO51259
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0556
p.P773S
DO38123
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1111
p.H768Y
DO219456
SKCM
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.25
p.A747T
DO229253
THCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0556
p.A756V
DO229213
THCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.3056
p.N765Y
DO229234
THCA
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.5948
p.D763Y
DO41199
UCEC
ICGC
VRVDLEDVN
DEG_APCC_DBOX_1
0.6214
p.G748W
SIDM00753
Squamous Cell Lung Carcinoma
GDSC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0833
p.G748W
NCI-H2023
lung
COSMIC
VRVDLEDVN
DEG_APCC_DBOX_1
0.0833
p.P773L
SIDM00140
Melanoma
GDSC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1111
p.P773L
COLO-792
skin
COSMIC
VRVDLEDVN
DEG_APCC_DBOX_1
0.1111
Drug responses associated with DCHS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVDLEDVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6V1P9
Protocadherin-23
DEG_APCC_DBOX_1
757:765
VRVDLEDVN
APC,CDC20,FZR1
0.6025
More...